myRT

myRT report for GCA_002224265.1_ASM222426v1

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Seq: CP012881.1 Vibrio vulnificus NBRC 15645 = ATCC 27562 chromosome 1, complete sequence (3266118 bp)
Overview 1 RT 1: 1436401-1450280 bp 2 RT 2: 2929387-2934390 bp 3 RT 3: 2988149-3001184 bp 4 RT 4: 3028615-3034887 bp Neighborhood of RT #1 [1436401, 1450280] PRK14200 SufI AE_Prim_S_like RVT-UG10 PRK09726 SLATT_5 RVT-UG17 SMC_prok_B Neighborhood of RT #2 [2929387, 2934390] PRK01617 RVT-GII GIIM COG4628 Neighborhood of RT #3 [2988149, 3001189] RVT-GII GIIM Acetyltransf_9 Acetyltransf_10 RVT-GII GIIM Peptidase_C92 CcdB Neighborhood of RT #4 [3028615, 3034907] RVT-GII GIIM Dabb Imm-NTF2 Feature: gene Location: 1436401-1436781 bp Ori: ASM96262.1 Feature: domain Description: PRK14200 Location: 1436404-1436776 bp Feature: domain Description: PRK1 4200 Location: 1 436404-1 436776 bp Feature: gene Location: 1436905-1438290 bp Ori: ASM96263.1 Feature: domain Description: SufI Location: 1436920-1438285 bp Feature: domain Description: SufI Location: 1 436920-1 438285 bp Feature: gene Location: 1439704-1445031 bp Ori: ASM96264.1 Feature: domain Description: AE_Prim_S_like Location: 1439779-1440088 bp Feature: domain Description: AE_Prim_S_like Location: 1 439779-1 440088 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 1441039-1441696 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 1 441 039-1 441 696 bp Feature: gene Location: 1445436-1445690 bp Ori: ASM96265.1 Feature: domain Description: PRK09726 Location: 1445442-1445646 bp Feature: domain Description: PRK09726 Location: 1 445442-1 445646 bp Feature: gene Location: 1446157-1446795 bp Ori: ASM96266.1 Feature: domain Description: SLATT_5 Location: 1446166-1446757 bp Feature: domain Description: SLATT_5 Location: 1 4461 66-1 446757 bp Feature: gene Location: 1446797-1448128 bp Ori: ASM96267.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1447025-1447628 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 447025-1 447628 bp Feature: gene Location: 1448486-1450045 bp Ori: ASM96268.1 Feature: domain Description: SMC_prok_B Location: 1449428-1449944 bp Feature: domain Description: SMC_prok_B Location: 1 449428-1 449944 bp Feature: gene Location: 1450038-1450280 bp Feature: gene Location: 2929387-2929965 bp Ori: ASM97484.1 Feature: domain Description: PRK01617 Location: 2929897-2929963 bp Feature: domain Description: PRK01 61 7 Location: 2929897-2929963 bp Feature: gene Location: 2930118-2930531 bp Feature: gene Location: 2931156-2932517 bp Ori: ASM97486.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2931435-2932128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2931 435-29321 28 bp Feature: domain Description: GIIM Note: maturase Location: 2932212-2932416 bp Feature: domain Description: GIIM Note: maturase Location: 293221 2-293241 6 bp Feature: gene Location: 2933188-2933409 bp Ori: ASM97487.1 Feature: domain Description: COG4628 Location: 2933197-2933404 bp Feature: domain Description: COG4628 Location: 29331 97-2933404 bp Feature: gene Location: 2933557-2934390 bp Feature: gene Location: 2988149-2988892 bp Feature: gene Location: 2988963-2989484 bp Feature: gene Location: 2990129-2991490 bp Ori: ASM97546.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2990408-2991101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2990408-2991 1 01 bp Feature: domain Description: GIIM Note: maturase Location: 2991185-2991389 bp Feature: domain Description: GIIM Note: maturase Location: 2991 1 85-2991 389 bp Feature: gene Location: 2992045-2992557 bp Ori: ASM97547.1 Feature: domain Description: Acetyltransf_9 Location: 2992168-2992414 bp Feature: domain Description: Acetyltransf_9 Location: 29921 68-299241 4 bp Feature: gene Location: 2992721-2993218 bp Ori: ASM97548.1 Feature: domain Description: Acetyltransf_10 Location: 2992976-2993171 bp Feature: domain Description: Acetyltransf_1 0 Location: 2992976-29931 71 bp Feature: gene Location: 2995213-2995494 bp Feature: gene Location: 2995567-2996031 bp Feature: gene Location: 2996862-2998223 bp Ori: ASM97553.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2997141-2997834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29971 41 -2997834 bp Feature: domain Description: GIIM Note: maturase Location: 2997918-2998122 bp Feature: domain Description: GIIM Note: maturase Location: 299791 8-29981 22 bp Feature: gene Location: 2999795-3000757 bp Ori: ASM97554.1 Feature: domain Description: Peptidase_C92 Location: 3000038-3000464 bp Feature: domain Description: Peptidase_C92 Location: 3000038-3000464 bp Feature: gene Location: 3000872-3001189 bp Ori: ASM97555.1 Feature: domain Description: CcdB Location: 3000881-3001184 bp Feature: domain Description: CcdB Location: 3000881 -3001 1 84 bp Feature: gene Location: 3028615-3029190 bp Feature: gene Location: 3029996-3030361 bp Feature: gene Location: 3030988-3032349 bp Ori: ASM97589.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3031267-3031960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3031 267-3031 960 bp Feature: domain Description: GIIM Note: maturase Location: 3032044-3032248 bp Feature: domain Description: GIIM Note: maturase Location: 3032044-3032248 bp Feature: gene Location: 3033516-3033812 bp Ori: ASM97590.1 Feature: domain Description: Dabb Location: 3033522-3033807 bp Feature: domain Description: Dabb Location: 3033522-3033807 bp Feature: gene Location: 3034452-3034907 bp Ori: ASM97591.1 Feature: domain Description: Imm-NTF2 Location: 3034530-3034887 bp Feature: domain Description: Imm-NTF2 Location: 3034530-3034887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14200 (fluoride efflux transporter CrcB), SufI (COG2132), AE_Prim_S_like (cl01287), RVT-UG10, PRK09726 (type II toxin-antitoxin system antitoxin HipB), SLATT_5 (pfam18160), RVT-UG17, SMC_prok_B (TIGR02168), PRK01617 (hypothetical protein; Provisional), RVT-GII
GIIM (pfam08388), COG4628 (Uncharacterized conserved protein, DUF2132 family ), Acetyltransf_9 (pfam13527), Acetyltransf_10 (pfam13673), Peptidase_C92 (pfam05708), CcdB (pfam01845), Dabb (smart00886), Imm-NTF2 (pfam15655)