myRT

myRT report for GCA_002234355.1_ASM223435v1

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Seq: CP022524.1 Clostridioides difficile strain DH/NAP11/106/ST-42 chromosome, complete genome (4087127 bp)
Overview 1 RT 1: 2453205-2458216 bp Neighborhood of RT #1 [2453205, 2458308] Acetyltransf_10 RVT-GII HNHc DUF3789 Rol_Rep_N Rep_trans Feature: gene Location: 2453205-2453501 bp Feature: gene Location: 2453608-2453988 bp Ori: ASN89939.1 Feature: domain Description: Acetyltransf_10 Location: 2453698-2453959 bp Feature: domain Description: Acetyltransf_1 0 Location: 2453698-2453959 bp Feature: gene Location: 2454394-2456304 bp Ori: ASN89940.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2454727-2455465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2454727-2455465 bp Feature: domain Description: HNHc Note: nucleases Location: 2456020-2456185 bp Feature: domain Description: HNHc Note: nucleases Location: 2456020-24561 85 bp Feature: gene Location: 2457046-2457180 bp Ori: ASN89941.1 Feature: domain Description: DUF3789 Location: 2457058-2457151 bp Feature: domain Description: DUF3789 Location: 2457058-24571 51 bp Feature: gene Location: 2457187-2458308 bp Ori: ASN89942.1 Feature: domain Description: Rol_Rep_N Location: 2457316-2457577 bp Feature: domain Description: Rol_Rep_N Location: 245731 6-2457577 bp Feature: domain Description: Rep_trans Location: 2457601-2458216 bp Feature: domain Description: Rep_trans Location: 2457601 -245821 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)