myRT

myRT report for GCA_002234515.1_ASM223451v1

Download annotations/find similar RTs

Seq: CP022489.1 Salmonella enterica subsp. enterica serovar Mbandaka strain SA20026234 chromosome, complete genome (4796292 bp)
Overview 1 RT 1: 303249-306312 bp 2 RT 2: 3425289-3431118 bp Neighborhood of RT #1 [303249, 306312] RVT-Retrons InsE Neighborhood of RT #2 [3425289, 3431123] DUF4156 DUF2188 RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 303249-303458 bp Feature: gene Location: 303524-304364 bp Feature: gene Location: 304414-305373 bp Ori: ASO23485.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 304594-305116 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 304594-3051 1 6 bp Feature: gene Location: 305404-305631 bp Feature: gene Location: 306063-306312 bp Ori: ASO23487.1 Feature: domain Description: InsE Location: 306072-306312 bp Feature: domain Description: InsE Location: 306072-30631 2 bp Feature: gene Location: 3425289-3425642 bp Ori: ASO26402.1 Feature: domain Description: DUF4156 Location: 3425358-3425634 bp Feature: domain Description: DUF41 56 Location: 3425358-3425634 bp Feature: gene Location: 3425997-3426227 bp Ori: ASO27753.1 Feature: domain Description: DUF2188 Location: 3426015-3426192 bp Feature: domain Description: DUF21 88 Location: 342601 5-34261 92 bp Feature: gene Location: 3426373-3428046 bp Ori: ASO26403.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3426436-3426670 bp Feature: domain Description: RVT_N Location: 3426436-3426670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3426724-3427369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3426724-3427369 bp Feature: domain Description: GIIM Note: maturase Location: 3427423-3427654 bp Feature: domain Description: GIIM Note: maturase Location: 3427423-3427654 bp Feature: domain Description: HNHc Note: nucleases Location: 3427864-3428020 bp Feature: domain Description: HNHc Note: nucleases Location: 3427864-3428020 bp Feature: gene Location: 3429140-3430786 bp Ori: ASO26404.1 Gene: groL Feature: domain Description: groEL Location: 3429146-3430772 bp Feature: domain Description: groEL Location: 34291 46-3430772 bp Feature: gene Location: 3430830-3431123 bp Ori: ASO26405.1 Gene: groES Feature: domain Description: groES Location: 3430833-3431118 bp Feature: domain Description: groES Location: 3430833-3431 1 1 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, InsE (COG2963), DUF4156 (pfam13698), DUF2188 (pfam09954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533)