myRT

myRT report for GCA_002237285.1_ASM223728v1

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Seq: CP012378.1 Escherichia coli strain MEM, complete genome (4928082 bp)
Overview 1 RT 1: 2139834-2144136 bp 2 RT 2: 3883403-3889294 bp Neighborhood of RT #1 [2139834, 2144138] PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [3883403, 3889311] HTH_38 Tra8 PHA02517 RVT-GII GIIM IS285 DDE_Tnp_IS66_C Feature: gene Location: 2139834-2140694 bp Feature: gene Location: 2140658-2141104 bp Ori: ASO78934.1 Feature: domain Description: PHA02517 Location: 2140661-2141102 bp Feature: domain Description: PHA0251 7 Location: 21 40661 -21 41 1 02 bp Feature: gene Location: 2141221-2142744 bp Ori: ASO78935.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2141494-2142226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 41 494-21 42226 bp Feature: domain Description: GIIM Note: maturase Location: 2142301-2142499 bp Feature: domain Description: GIIM Note: maturase Location: 21 42301 -21 42499 bp Feature: gene Location: 2143336-2143815 bp Ori: ASO78936.1 Feature: domain Description: PHA02517 Location: 2143396-2143750 bp Feature: domain Description: PHA0251 7 Location: 21 43396-21 43750 bp Feature: gene Location: 2143815-2144138 bp Ori: ASO78937.1 Feature: domain Description: InsE Location: 2143827-2144136 bp Feature: domain Description: InsE Location: 21 43827-21 441 36 bp Feature: gene Location: 3883403-3884554 bp Ori: ASO80684.1 Feature: domain Description: HTH_38 Location: 3883412-3883526 bp Feature: domain Description: HTH_38 Location: 388341 2-3883526 bp Feature: domain Description: Tra8 Location: 3883562-3884543 bp Feature: domain Description: Tra8 Location: 3883562-3884543 bp Feature: gene Location: 3884816-3885055 bp Ori: ASO80685.1 Feature: domain Description: PHA02517 Location: 3884819-3884990 bp Feature: domain Description: PHA0251 7 Location: 388481 9-3884990 bp Feature: gene Location: 3885647-3887170 bp Ori: ASO80686.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3885920-3886652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3885920-3886652 bp Feature: domain Description: GIIM Note: maturase Location: 3886727-3886925 bp Feature: domain Description: GIIM Note: maturase Location: 3886727-3886925 bp Feature: gene Location: 3887637-3888935 bp Ori: ASO80687.1 Feature: domain Description: IS285 Location: 3887667-3888825 bp Feature: domain Description: IS285 Location: 3887667-3888825 bp Feature: gene Location: 3889153-3889311 bp Ori: ASO80688.1 Feature: domain Description: DDE_Tnp_IS66_C Location: 3889183-3889294 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 38891 83-3889294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), HTH_38 (pfam13936), Tra8 (COG2826), IS285 (COG3328), DDE_Tnp_IS66_C (pfam13817)