myRT

myRT report for GCA_002240155.1_ASM224015v1

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Seq: CP022223.1 Mycobacterium chimaera strain SJ42 chromosome, complete genome (5891614 bp)
Overview 1 RT 1: 460982-467508 bp 2 RT 2: 1789382-1794622 bp 3 RT 3: 3922621-3928276 bp Neighborhood of RT #1 [460982, 467540] COG5651 RVT-GII GIIM rve MlaE Neighborhood of RT #2 [1789382, 1794636] COG3462 RVT-GII GIIM NuoN Neighborhood of RT #3 [3922621, 3928296] AdaB RVT-GII GIIM LZ_Tnp_IS481 Tra5 DUF1490 Feature: gene Location: 460982-462220 bp Ori: ASQ84623.1 Feature: domain Description: COG5651 Location: 460991-462215 bp Feature: domain Description: COG5651 Location: 460991 -46221 5 bp Feature: gene Location: 462225-462641 bp Feature: gene Location: 462979-464352 bp Ori: ASQ84625.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463330-463954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463330-463954 bp Feature: domain Description: GIIM Note: maturase Location: 464047-464254 bp Feature: domain Description: GIIM Note: maturase Location: 464047-464254 bp Feature: gene Location: 465717-466301 bp Feature: domain Description: rve Location: 465723-465969 bp Feature: domain Description: rve Location: 465723-465969 bp Feature: gene Location: 466653-467540 bp Ori: ASQ84626.1 Feature: domain Description: MlaE Location: 466884-467508 bp Feature: domain Description: MlaE Location: 466884-467508 bp Feature: gene Location: 1789382-1789645 bp Ori: ASQ85689.1 Feature: domain Description: COG3462 Location: 1789406-1789625 bp Feature: domain Description: COG3462 Location: 1 789406-1 789625 bp Feature: gene Location: 1790134-1790331 bp Feature: gene Location: 1790709-1792103 bp Ori: ASQ85691.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1790973-1791669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 790973-1 791 669 bp Feature: domain Description: GIIM Note: maturase Location: 1791738-1791951 bp Feature: domain Description: GIIM Note: maturase Location: 1 791 738-1 791 951 bp Feature: gene Location: 1792851-1793176 bp Feature: gene Location: 1793236-1794636 bp Ori: ASQ89098.1 Feature: domain Description: NuoN Location: 1793251-1794622 bp Feature: domain Description: NuoN Location: 1 793251 -1 794622 bp Feature: gene Location: 3922621-3922929 bp Feature: gene Location: 3922982-3923206 bp Feature: domain Description: AdaB Location: 3922985-3923177 bp Feature: domain Description: AdaB Location: 3922985-39231 77 bp Feature: gene Location: 3923464-3924858 bp Ori: ASQ87249.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3923728-3924424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3923728-3924424 bp Feature: domain Description: GIIM Note: maturase Location: 3924493-3924712 bp Feature: domain Description: GIIM Note: maturase Location: 3924493-392471 2 bp Feature: gene Location: 3925543-3927369 bp Ori: ASQ87250.1 Feature: domain Description: LZ_Tnp_IS481 Location: 3925609-3925783 bp Feature: domain Description: LZ_Tnp_IS481 Location: 3925609-3925783 bp Feature: domain Description: Tra5 Location: 3925786-3926446 bp Feature: domain Description: Tra5 Location: 3925786-3926446 bp Feature: gene Location: 3928015-3928296 bp Ori: ASQ89302.1 Feature: domain Description: DUF1490 Location: 3928018-3928276 bp Feature: domain Description: DUF1 490 Location: 392801 8-3928276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5651 (PPE-repeat protein ), RVT-GII, GIIM (pfam08388), rve (pfam00665), MlaE (pfam02405), COG3462 (Uncharacterized membrane protein ), NuoN (COG1007), AdaB (COG0350), LZ_Tnp_IS481 (pfam13011), Tra5 (COG2801)
DUF1490 (pfam07371)