myRT

myRT report for GCA_002240185.1_ASM224018v1

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Seq: CP022564.1 Rhizobium leguminosarum bv. viciae strain BIHB 1148 chromosome, complete genome (4418978 bp)
Overview 1 RT 1: 3590432-3595458 bp 2 RT 2: 3842083-3847148 bp Neighborhood of RT #1 [3590432, 3595458] NT_2-5OAS_ClassI-CCAase RVT-UG2 CoiA Neighborhood of RT #2 [3842083, 3847156] FcbT1 RVT-GII FcbT3 FcbT2 Feature: gene Location: 3590432-3591334 bp Ori: ASR08874.1 Feature: domain Description: NT_2-5OAS_ClassI-CCAase Location: 3590498-3590921 bp Feature: domain Description: NT_2-5OAS_ClassI-CCAase Location: 3590498-3590921 bp Feature: gene Location: 3591344-3592066 bp Feature: gene Location: 3592719-3593966 bp Ori: ASR08876.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3592893-3593673 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3592893-3593673 bp Feature: gene Location: 3593994-3594797 bp Ori: ASR08877.1 Feature: domain Description: CoiA Location: 3594048-3594408 bp Feature: domain Description: CoiA Location: 3594048-3594408 bp Feature: gene Location: 3594820-3595458 bp Feature: gene Location: 3842083-3843189 bp Ori: ASR09084.1 Feature: domain Description: FcbT1 Location: 3842086-3843163 bp Feature: domain Description: FcbT1 Location: 3842086-38431 63 bp Feature: gene Location: 3843256-3843584 bp Feature: gene Location: 3843644-3845001 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3843971-3844427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3843971 -3844427 bp Feature: gene Location: 3845105-3846595 bp Ori: ASR09085.1 Feature: domain Description: FcbT3 Location: 3845123-3846431 bp Feature: domain Description: FcbT3 Location: 38451 23-3846431 bp Feature: gene Location: 3846617-3847156 bp Ori: ASR09086.1 Feature: domain Description: FcbT2 Location: 3846620-3847148 bp Feature: domain Description: FcbT2 Location: 3846620-38471 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NT_2-5OAS_ClassI-CCAase (cd05400), RVT-UG2, CoiA (pfam06054), FcbT1 (COG4663), RVT-GII, FcbT3 (COG4664), FcbT2 (COG4665)