myRT

myRT report for GCA_002243365.1_ASM224336v1

Download annotations/find similar RTs

Seq: CP022670.1 Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR5, complete sequence (179782 bp)
Overview 1 RT 1: 59759-66429 bp Neighborhood of RT #1 [59759, 67160] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII PLDc_unchar6 YbjD YbjD Feature: gene Location: 59759-60112 bp Ori: ASS60408.1 Feature: domain Description: TnpB_IS66 Location: 59786-60074 bp Feature: domain Description: TnpB_IS66 Location: 59786-60074 bp Feature: gene Location: 60165-61754 bp Ori: ASS60409.1 Feature: domain Description: LZ_Tnp_IS66 Location: 60282-60510 bp Feature: domain Description: LZ_Tnp_IS66 Location: 60282-6051 0 bp Feature: domain Description: zf-IS66 Location: 60537-60663 bp Feature: domain Description: zf-IS66 Location: 60537-60663 bp Feature: domain Description: DDE_Tnp_IS66 Location: 60726-61593 bp Feature: domain Description: DDE_Tnp_IS66 Location: 60726-61 593 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 61614-61725 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 61 61 4-61 725 bp Feature: gene Location: 61864-63687 bp Ori: ASS60410.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62602-63292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62602-63292 bp Feature: gene Location: 63829-64755 bp Ori: ASS60411.1 Feature: domain Description: PLDc_unchar6 Location: 64204-64579 bp Feature: domain Description: PLDc_unchar6 Location: 64204-64579 bp Feature: gene Location: 65331-67160 bp Ori: ASS60412.1 Feature: domain Description: YbjD Location: 65334-65664 bp Feature: domain Description: YbjD Location: 65334-65664 bp Feature: domain Description: YbjD Location: 66156-66429 bp Feature: domain Description: YbjD Location: 661 56-66429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, PLDc_unchar6 (cd09176), YbjD (COG3593)