myRT

myRT report for GCA_002243445.1_ASM224344v1

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Seq: CP022574.1 Klebsiella pneumoniae strain BIC-1 plasmid pBIC-1a, complete sequence (170415 bp)
Overview 1 RT 1: 79902-83150 bp Neighborhood of RT #1 [79902, 83164] RVT-GII PRK10276 Feature: gene Location: 79902-80083 bp Feature: gene Location: 80385-80615 bp Feature: gene Location: 80849-82333 bp Ori: ASS82842.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81251-81941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 251 -81 941 bp Feature: gene Location: 82333-82584 bp Feature: gene Location: 82739-83164 bp Ori: ASS82844.1 Feature: domain Description: PRK10276 Location: 82742-83150 bp Feature: domain Description: PRK1 0276 Location: 82742-831 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP022573.1 Klebsiella pneumoniae strain BIC-1 chromosome, complete genome (5394314 bp)
Overview 1 RT 1: 343149-347678 bp 2 RT 2: 523513-527612 bp 3 RT 3: 865861-870699 bp 4 RT 4: 1310474-1313254 bp 5 RT 5: 4492574-4496292 bp Neighborhood of RT #1 [343149, 347719] umuC PRK10276 RVT-GII XerC Neighborhood of RT #2 [523513, 527623] umuC PRK10276 RVT-GII DinI Neighborhood of RT #3 [865861, 870749] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Neighborhood of RT #4 [1310474, 1313254] PRK10276 PRK10276 RVT-GII Neighborhood of RT #5 [4492574, 4496303] dacD RVT-GII PRK10016 Feature: gene Location: 343149-344414 bp Ori: ASS77849.1 Feature: domain Description: umuC Location: 343152-344412 bp Feature: domain Description: umuC Location: 343152 -344412 bp Feature: gene Location: 344416-344835 bp Ori: ASS77850.1 Feature: domain Description: PRK10276 Location: 344419-344830 bp Feature: domain Description: PRK102 76 Location: 344419-344830 bp Feature: gene Location: 344915-346399 bp Ori: ASS77851.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345317-346007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345317-346007 bp Feature: gene Location: 346399-346650 bp Feature: gene Location: 347297-347719 bp Ori: ASS77853.1 Feature: domain Description: XerC Location: 347333-347678 bp Feature: domain Description: XerC Location: 347333-347678 bp Feature: gene Location: 523513-524778 bp Ori: ASS78032.1 Feature: domain Description: umuC Location: 523516-524776 bp Feature: domain Description: umuC Location: 52 3516-52 4776 bp Feature: gene Location: 524781-525200 bp Ori: ASS78033.1 Feature: domain Description: PRK10276 Location: 524784-525195 bp Feature: domain Description: PRK102 76 Location: 52 4784-52 5195 bp Feature: gene Location: 525279-526763 bp Ori: ASS78034.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525681-526371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 5681-52 6371 bp Feature: gene Location: 526763-527014 bp Feature: gene Location: 527381-527623 bp Ori: ASS78036.1 Feature: domain Description: DinI Location: 527432-527612 bp Feature: domain Description: DinI Location: 52 7432 -52 7612 bp Feature: gene Location: 865861-866739 bp Ori: ASS82574.1 Feature: domain Description: Phage_CI_repr Location: 865888-866071 bp Feature: domain Description: Phage_CI_repr Location: 865888-866071 bp Feature: domain Description: Phage_CI_repr Location: 866200-866392 bp Feature: domain Description: Phage_CI_repr Location: 8662 00-866392 bp Feature: domain Description: Phage_CI_C Location: 866419-866713 bp Feature: domain Description: Phage_CI_C Location: 866419-866713 bp Feature: gene Location: 866751-867695 bp Feature: gene Location: 867794-869278 bp Ori: ASS78353.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 868196-868886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 868196-868886 bp Feature: gene Location: 869278-869529 bp Feature: gene Location: 869697-870749 bp Ori: ASS78355.1 Feature: domain Description: int Location: 869700-870699 bp Feature: domain Description: int Location: 869700-870699 bp Feature: gene Location: 1310474-1310791 bp Ori: ASS78742.1 Feature: domain Description: PRK10276 Location: 1310480-1310594 bp Feature: domain Description: PRK102 76 Location: 1310480-1310594 bp Feature: domain Description: PRK10276 Location: 1310621-1310690 bp Feature: domain Description: PRK102 76 Location: 131062 1-1310690 bp Feature: gene Location: 1310791-1311030 bp Feature: gene Location: 1311108-1312592 bp Ori: ASS78744.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1311510-1312200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1311510-1312 2 00 bp Feature: gene Location: 1312592-1312843 bp Feature: gene Location: 1313045-1313254 bp Feature: gene Location: 4492574-4493743 bp Ori: ASS81673.1 Feature: domain Description: dacD Location: 4492583-4493738 bp Feature: domain Description: dacD Location: 4492 583-4493738 bp Feature: gene Location: 4494013-4494264 bp Feature: gene Location: 4494264-4495748 bp Ori: ASS81675.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4494666-4495356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4494666-4495356 bp Feature: gene Location: 4495694-4495921 bp Feature: gene Location: 4495830-4496303 bp Ori: ASS81677.1 Feature: domain Description: PRK10016 Location: 4495833-4496292 bp Feature: domain Description: PRK10016 Location: 4495833-44962 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, XerC (COG4973), DinI (pfam06183), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC)