myRT

myRT report for GCA_002243625.1_ASM224362v1

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Seq: CP017703.1 Aeribacillus pallidus strain KCTC3564, complete genome (4089457 bp)
Overview 1 RT 1: 1649021-1653984 bp 2 RT 2: 1725346-1728472 bp 3 RT 3: 2171036-2178539 bp 4 RT 4: 2242608-2246599 bp 5 RT 5: 2357068-2362995 bp 6 RT 6: 2627766-2633155 bp 7 RT 7: 2971256-2976766 bp 8 RT 8: 3885668-3892022 bp 9 RT 9: 3930912-3939989 bp 10 RT 10: 3985488-3992155 bp Neighborhood of RT #1 [1649021, 1654010] SLC-NCS1sbd RVT-GII GIIM BglB Peptidases_S8_4 Neighborhood of RT #2 [1725346, 1728474] DinB_2 COG3435 RVT-GII GIIM PRK07738 Neighborhood of RT #3 [2171036, 2178553] trehalose_treC trehalos_R_Bsub RVT-GII GIIM HTH_ARSR copA P-type_ATPase_Cd-like Neighborhood of RT #4 [2242608, 2246607] RVT-GII GIIM InsE PHA02517 Neighborhood of RT #5 [2357068, 2363012] TrxB TrxB CwlJ RVT-GII GIIM DDE_Tnp_1 DUF1540 Neighborhood of RT #6 [2627766, 2633169] CcmA RVT-GII GIIM InsE PHA02517 Neighborhood of RT #7 [2971256, 2976777] ModC HTH_17 YvgK RVT-GII GIIM TsaA PBP2_YvgL_like Neighborhood of RT #8 [3885668, 3892030] Spore_YhcN_YlaJ nadE RVT-GII GIIM GIIM spore_safA PRK09375 Neighborhood of RT #9 [3930912, 3940000] Lon spore_lonB RVT-GII GIIM clpX tig Neighborhood of RT #10 [3985488, 3992187] SspH PRK13317 RVT-GII GIIM thrS spo_ytxC Feature: gene Location: 1649021-1650511 bp Ori: ASS90175.1 Feature: domain Description: SLC-NCS1sbd Location: 1649087-1650350 bp Feature: domain Description: SLC-NCS1 sbd Location: 1 649087-1 650350 bp Feature: gene Location: 1650830-1651057 bp Feature: gene Location: 1651784-1653043 bp Ori: ASS92321.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1651982-1652600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 651 982-1 652600 bp Feature: domain Description: GIIM Note: maturase Location: 1652648-1652864 bp Feature: domain Description: GIIM Note: maturase Location: 1 652648-1 652864 bp Feature: gene Location: 1653104-1653538 bp Feature: domain Description: BglB Location: 1653113-1653536 bp Feature: domain Description: BglB Location: 1 6531 1 3-1 653536 bp Feature: gene Location: 1653558-1654010 bp Ori: ASS90177.1 Feature: domain Description: Peptidases_S8_4 Location: 1653582-1653984 bp Feature: domain Description: Peptidases_S8_4 Location: 1 653582-1 653984 bp Feature: gene Location: 1725346-1725825 bp Ori: ASS90233.1 Feature: domain Description: DinB_2 Location: 1725382-1725802 bp Feature: domain Description: DinB_2 Location: 1 725382-1 725802 bp Feature: gene Location: 1725850-1726962 bp Ori: ASS90234.1 Feature: domain Description: COG3435 Location: 1725874-1726915 bp Feature: domain Description: COG3435 Location: 1 725874-1 72691 5 bp Feature: gene Location: 1727233-1727475 bp Ori: ASS90235.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1727236-1727398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 727236-1 727398 bp Feature: gene Location: 1727539-1727766 bp Ori: ASS90236.1 Feature: domain Description: GIIM Note: maturase Location: 1727545-1727713 bp Feature: domain Description: GIIM Note: maturase Location: 1 727545-1 72771 3 bp Feature: gene Location: 1728130-1728474 bp Ori: ASS90237.1 Feature: domain Description: PRK07738 Location: 1728178-1728472 bp Feature: domain Description: PRK07738 Location: 1 7281 78-1 728472 bp Feature: gene Location: 2171036-2172721 bp Ori: ASS90608.1 Feature: domain Description: trehalose_treC Location: 2171051-2172710 bp Feature: domain Description: trehalose_treC Location: 21 71 051 -21 7271 0 bp Feature: gene Location: 2172745-2173491 bp Ori: ASS90609.1 Feature: domain Description: trehalos_R_Bsub Location: 2172760-2173453 bp Feature: domain Description: trehalos_R_Bsub Location: 21 72760-21 73453 bp Feature: gene Location: 2174544-2175803 bp Ori: ASS92364.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2174742-2175360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 74742-21 75360 bp Feature: domain Description: GIIM Note: maturase Location: 2175408-2175621 bp Feature: domain Description: GIIM Note: maturase Location: 21 75408-21 75621 bp Feature: gene Location: 2176054-2176422 bp Ori: ASS90610.1 Feature: domain Description: HTH_ARSR Location: 2176162-2176378 bp Feature: domain Description: HTH_ARSR Location: 21 761 62-21 76378 bp Feature: gene Location: 2176415-2178553 bp Ori: ASS90611.1 Feature: domain Description: copA Location: 2176442-2176616 bp Feature: domain Description: copA Location: 21 76442-21 7661 6 bp Feature: domain Description: P-type_ATPase_Cd-like Location: 2176754-2178539 bp Feature: domain Description: P-type_ATPase_Cd-like Location: 21 76754-21 78539 bp Feature: gene Location: 2242608-2243186 bp Feature: gene Location: 2243262-2243585 bp Feature: gene Location: 2244265-2245371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2244463-2245081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2244463-2245081 bp Feature: domain Description: GIIM Note: maturase Location: 2245129-2245342 bp Feature: domain Description: GIIM Note: maturase Location: 22451 29-2245342 bp Feature: gene Location: 2245447-2245741 bp Feature: domain Description: InsE Location: 2245450-2245594 bp Feature: domain Description: InsE Location: 2245450-2245594 bp Feature: gene Location: 2245789-2246607 bp Ori: ASS90659.1 Feature: domain Description: PHA02517 Location: 2245804-2246599 bp Feature: domain Description: PHA0251 7 Location: 2245804-2246599 bp Feature: gene Location: 2357068-2357631 bp Ori: ASS90745.1 Feature: domain Description: TrxB Location: 2357071-2357404 bp Feature: domain Description: TrxB Location: 2357071 -2357404 bp Feature: domain Description: TrxB Location: 2357461-2357596 bp Feature: domain Description: TrxB Location: 2357461 -2357596 bp Feature: gene Location: 2357936-2358517 bp Ori: ASS90746.1 Feature: domain Description: CwlJ Location: 2358110-2358515 bp Feature: domain Description: CwlJ Location: 23581 1 0-235851 5 bp Feature: gene Location: 2359746-2361005 bp Ori: ASS92382.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2359944-2360562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2359944-2360562 bp Feature: domain Description: GIIM Note: maturase Location: 2360610-2360823 bp Feature: domain Description: GIIM Note: maturase Location: 236061 0-2360823 bp Feature: gene Location: 2361159-2362490 bp Ori: ASS90747.1 Feature: domain Description: DDE_Tnp_1 Location: 2361507-2362248 bp Feature: domain Description: DDE_Tnp_1 Location: 2361 507-2362248 bp Feature: gene Location: 2362854-2363012 bp Ori: ASS90748.1 Feature: domain Description: DUF1540 Location: 2362869-2362995 bp Feature: domain Description: DUF1 540 Location: 2362869-2362995 bp Feature: gene Location: 2627766-2628641 bp Ori: ASS90953.1 Feature: domain Description: CcmA Location: 2627775-2628603 bp Feature: domain Description: CcmA Location: 2627775-2628603 bp Feature: gene Location: 2629521-2630234 bp Feature: gene Location: 2630925-2631965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2631123-2631741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2631 1 23-2631 741 bp Feature: domain Description: GIIM Note: maturase Location: 2631789-2631915 bp Feature: domain Description: GIIM Note: maturase Location: 2631 789-2631 91 5 bp Feature: gene Location: 2631998-2632285 bp Ori: ASS90955.1 Feature: domain Description: InsE Location: 2632007-2632274 bp Feature: domain Description: InsE Location: 2632007-2632274 bp Feature: gene Location: 2632333-2633169 bp Ori: ASS90956.1 Feature: domain Description: PHA02517 Location: 2632348-2633155 bp Feature: domain Description: PHA0251 7 Location: 2632348-26331 55 bp Feature: gene Location: 2971256-2971930 bp Ori: ASS91228.1 Feature: domain Description: ModC Location: 2971268-2971910 bp Feature: domain Description: ModC Location: 2971 268-2971 91 0 bp Feature: gene Location: 2972234-2973181 bp Ori: ASS91229.1 Feature: domain Description: HTH_17 Location: 2972255-2972396 bp Feature: domain Description: HTH_1 7 Location: 2972255-2972396 bp Feature: domain Description: YvgK Location: 2972492-2973176 bp Feature: domain Description: YvgK Location: 2972492-29731 76 bp Feature: gene Location: 2973787-2975046 bp Ori: ASS92428.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2973985-2974603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2973985-2974603 bp Feature: domain Description: GIIM Note: maturase Location: 2974651-2974864 bp Feature: domain Description: GIIM Note: maturase Location: 2974651 -2974864 bp Feature: gene Location: 2975272-2975751 bp Ori: ASS91230.1 Feature: domain Description: TsaA Location: 2975275-2975710 bp Feature: domain Description: TsaA Location: 2975275-297571 0 bp Feature: gene Location: 2975965-2976777 bp Ori: ASS91231.1 Feature: domain Description: PBP2_YvgL_like Location: 2976094-2976766 bp Feature: domain Description: PBP2_YvgL_like Location: 2976094-2976766 bp Feature: gene Location: 3885668-3886336 bp Ori: ASS92032.1 Feature: domain Description: Spore_YhcN_YlaJ Location: 3885872-3886298 bp Feature: domain Description: Spore_YhcN_YlaJ Location: 3885872-3886298 bp Feature: gene Location: 3886432-3887172 bp Ori: ASS92033.1 Feature: domain Description: nadE Location: 3886438-3887149 bp Feature: domain Description: nadE Location: 3886438-38871 49 bp Feature: gene Location: 3887355-3888791 bp Ori: ASS92034.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3887583-3888207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3887583-3888207 bp Feature: domain Description: GIIM Note: maturase Location: 3888282-3888399 bp Feature: domain Description: GIIM Note: maturase Location: 3888282-3888399 bp Feature: domain Description: GIIM Note: maturase Location: 3888480-3888570 bp Feature: domain Description: GIIM Note: maturase Location: 3888480-3888570 bp Feature: gene Location: 3889481-3890620 bp Ori: ASS92035.1 Feature: domain Description: spore_safA Location: 3889499-3889628 bp Feature: domain Description: spore_safA Location: 3889499-3889628 bp Feature: gene Location: 3890918-3892030 bp Ori: ASS92036.1 Feature: domain Description: PRK09375 Location: 3890948-3892022 bp Feature: domain Description: PRK09375 Location: 3890948-3892022 bp Feature: gene Location: 3930912-3933236 bp Ori: ASS92075.1 Feature: domain Description: Lon Location: 3930924-3933225 bp Feature: domain Description: Lon Location: 3930924-3933225 bp Feature: gene Location: 3933424-3935082 bp Ori: ASS92076.1 Feature: domain Description: spore_lonB Location: 3933439-3935023 bp Feature: domain Description: spore_lonB Location: 3933439-3935023 bp Feature: gene Location: 3935244-3936503 bp Ori: ASS92491.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3935442-3936060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3935442-3936060 bp Feature: domain Description: GIIM Note: maturase Location: 3936108-3936321 bp Feature: domain Description: GIIM Note: maturase Location: 39361 08-3936321 bp Feature: gene Location: 3937173-3938438 bp Ori: ASS92077.1 Feature: domain Description: clpX Location: 3937179-3938391 bp Feature: domain Description: clpX Location: 39371 79-3938391 bp Feature: gene Location: 3938714-3940000 bp Ori: ASS92078.1 Feature: domain Description: tig Location: 3938717-3939989 bp Feature: domain Description: tig Location: 393871 7-3939989 bp Feature: gene Location: 3985488-3985667 bp Ori: ASS92121.1 Feature: domain Description: SspH Location: 3985491-3985662 bp Feature: domain Description: SspH Location: 3985491 -3985662 bp Feature: gene Location: 3985688-3986491 bp Ori: ASS92122.1 Feature: domain Description: PRK13317 Location: 3985694-3986486 bp Feature: domain Description: PRK1 331 7 Location: 3985694-3986486 bp Feature: gene Location: 3986591-3987850 bp Ori: ASS92493.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3986789-3987407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3986789-3987407 bp Feature: domain Description: GIIM Note: maturase Location: 3987455-3987668 bp Feature: domain Description: GIIM Note: maturase Location: 3987455-3987668 bp Feature: gene Location: 3988435-3990366 bp Ori: ASS92123.1 Feature: domain Description: thrS Location: 3988450-3990355 bp Feature: domain Description: thrS Location: 3988450-3990355 bp Feature: gene Location: 3991360-3992187 bp Ori: ASS92124.1 Feature: domain Description: spo_ytxC Location: 3991474-3992155 bp Feature: domain Description: spo_ytxC Location: 3991 474-39921 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLC-NCS1sbd (cd10323), RVT-GII, GIIM (pfam08388), BglB (COG2723), Peptidases_S8_4 (cd05561), DinB_2 (pfam12867), COG3435 (Gentisate 1,2-dioxygenase ), PRK07738 (flagellar protein FlaG; Provisional), trehalose_treC (TIGR02403), trehalos_R_Bsub (TIGR02404)
HTH_ARSR (smart00418), copA (PRK10671), P-type_ATPase_Cd-like (cd07545), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), TrxB (COG0492), CwlJ (COG3773), DDE_Tnp_1 (pfam01609), DUF1540 (pfam07561), CcmA (COG4133)
ModC (COG4149), HTH_17 (pfam12728), YvgK (COG1910), TsaA (COG1720), PBP2_YvgL_like (cd13537), Spore_YhcN_YlaJ (pfam09580), nadE (TIGR00552), spore_safA (TIGR02899), PRK09375 (quinolinate synthase NadA), Lon (COG0466)
spore_lonB (TIGR02902), clpX, tig (TIGR00115), SspH (pfam08141), PRK13317 (pantothenate kinase; Provisional), thrS (TIGR00418), spo_ytxC (TIGR02834)