myRT

myRT report for GCA_002249955.1_ASM224995v1

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Seq: CP022688.1 Escherichia coli strain CDC#03-98 plasmid p0157, complete sequence (92032 bp)
Overview 1 RT 1: 34869-38796 bp Neighborhood of RT #1 [34869, 38796] DUF1281 DUF1281_C RVT_N RVT-GII YkfC HNHc Feature: gene Location: 34869-35174 bp Feature: gene Location: 35178-36080 bp Ori: AST61861.1 Feature: domain Description: DUF1281 Location: 35247-35775 bp Feature: domain Description: DUF1 281 Location: 35247-35775 bp Feature: domain Description: DUF1281_C Location: 35781-36009 bp Feature: domain Description: DUF1 281 _C Location: 35781 -36009 bp Feature: gene Location: 36157-37881 bp Ori: AST61862.1 Gene: ltrA Feature: domain Description: RVT_N Location: 36214-36451 bp Feature: domain Description: RVT_N Location: 3621 4-36451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36502-37150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36502-371 50 bp Feature: domain Description: YkfC Location: 37282-37438 bp Feature: domain Description: YkfC Location: 37282-37438 bp Feature: domain Description: HNHc Note: nucleases Location: 37666-37825 bp Feature: domain Description: HNHc Note: nucleases Location: 37666-37825 bp Feature: gene Location: 38144-38440 bp Feature: gene Location: 38524-38796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), DUF1281_C (pfam18406), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)