myRT

myRT report for GCA_002249975.1_ASM224997v1

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Seq: CP022692.1 Klebsiella pneumoniae subsp. pneumoniae strain AUSMDU00008079 plasmid pAUSMDU8079-1, complete sequence (207349 bp)
Overview 1 RT 1: 197026-200274 bp Neighborhood of RT #1 [197026, 200288] RVT-GII PRK10276 Feature: gene Location: 197026-197207 bp Feature: gene Location: 197509-197739 bp Feature: gene Location: 197973-199457 bp Ori: AST77370.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198375-199065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 98375-1 99065 bp Feature: gene Location: 199457-199708 bp Feature: gene Location: 199863-200288 bp Ori: AST77372.1 Feature: domain Description: PRK10276 Location: 199866-200274 bp Feature: domain Description: PRK1 0276 Location: 1 99866-200274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP022691.1 Klebsiella pneumoniae subsp. pneumoniae strain AUSMDU00008079 chromosome, complete genome (5449899 bp)
Overview 1 RT 1: 1389274-1392331 bp 2 RT 2: 1811823-1815541 bp 3 RT 3: 3109099-3113628 bp 4 RT 4: 3289461-3293560 bp 5 RT 5: 3633009-3637847 bp 6 RT 6: 4076422-4079202 bp Neighborhood of RT #1 [1389274, 1394241] DUF1902 RVT-GII PHA02515 Neighborhood of RT #2 [1811823, 1815552] dacD RVT-GII PRK10016 Neighborhood of RT #3 [3109099, 3113669] umuC PRK10276 RVT-GII XerC Neighborhood of RT #4 [3289461, 3293571] umuC PRK10276 RVT-GII DinI Neighborhood of RT #5 [3633009, 3637897] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Neighborhood of RT #6 [4076422, 4079202] PRK10276 PRK10276 RVT-GII Feature: gene Location: 1389274-1389531 bp Ori: AST73226.1 Feature: domain Description: DUF1902 Location: 1389316-1389502 bp Feature: domain Description: DUF1902 Location: 1389316-1389502 bp Feature: gene Location: 1389622-1389882 bp Feature: gene Location: 1389960-1391444 bp Ori: AST73227.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1390362-1391052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1390362 -1391052 bp Feature: gene Location: 1391444-1391695 bp Feature: gene Location: 1391980-1394241 bp Ori: AST73229.1 Feature: domain Description: PHA02515 Location: 1391992-1392331 bp Feature: domain Description: PHA02 515 Location: 1391992 -1392 331 bp Feature: gene Location: 1811823-1812992 bp Ori: AST73580.1 Feature: domain Description: dacD Location: 1811832-1812987 bp Feature: domain Description: dacD Location: 1811832 -1812 987 bp Feature: gene Location: 1813262-1813513 bp Feature: gene Location: 1813513-1814997 bp Ori: AST73582.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1813915-1814605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1813915-1814605 bp Feature: gene Location: 1814943-1815170 bp Feature: gene Location: 1815079-1815552 bp Ori: AST73584.1 Feature: domain Description: PRK10016 Location: 1815082-1815541 bp Feature: domain Description: PRK10016 Location: 1815082 -1815541 bp Feature: gene Location: 3109099-3110364 bp Ori: AST74812.1 Feature: domain Description: umuC Location: 3109102-3110362 bp Feature: domain Description: umuC Location: 3109102 -3110362 bp Feature: gene Location: 3110366-3110785 bp Ori: AST74813.1 Feature: domain Description: PRK10276 Location: 3110369-3110780 bp Feature: domain Description: PRK102 76 Location: 3110369-3110780 bp Feature: gene Location: 3110865-3112349 bp Ori: AST74814.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3111267-3111957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31112 67-3111957 bp Feature: gene Location: 3112349-3112600 bp Feature: gene Location: 3113247-3113669 bp Ori: AST74816.1 Feature: domain Description: XerC Location: 3113283-3113628 bp Feature: domain Description: XerC Location: 31132 83-311362 8 bp Feature: gene Location: 3289461-3290726 bp Ori: AST74995.1 Feature: domain Description: umuC Location: 3289464-3290724 bp Feature: domain Description: umuC Location: 32 89464-32 9072 4 bp Feature: gene Location: 3290729-3291148 bp Ori: AST74996.1 Feature: domain Description: PRK10276 Location: 3290732-3291143 bp Feature: domain Description: PRK102 76 Location: 32 90732 -32 91143 bp Feature: gene Location: 3291227-3292711 bp Ori: AST74997.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3291629-3292319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 9162 9-32 92 319 bp Feature: gene Location: 3292711-3292962 bp Feature: gene Location: 3293329-3293571 bp Ori: AST74999.1 Feature: domain Description: DinI Location: 3293380-3293560 bp Feature: domain Description: DinI Location: 32 93380-32 93560 bp Feature: gene Location: 3633009-3633887 bp Ori: AST75317.1 Feature: domain Description: Phage_CI_repr Location: 3633036-3633219 bp Feature: domain Description: Phage_CI_repr Location: 3633036-36332 19 bp Feature: domain Description: Phage_CI_repr Location: 3633348-3633540 bp Feature: domain Description: Phage_CI_repr Location: 3633348-3633540 bp Feature: domain Description: Phage_CI_C Location: 3633567-3633861 bp Feature: domain Description: Phage_CI_C Location: 3633567-3633861 bp Feature: gene Location: 3633899-3634843 bp Feature: gene Location: 3634942-3636426 bp Ori: AST75319.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3635344-3636034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3635344-3636034 bp Feature: gene Location: 3636426-3636677 bp Feature: gene Location: 3636845-3637897 bp Ori: AST75321.1 Feature: domain Description: int Location: 3636848-3637847 bp Feature: domain Description: int Location: 3636848-3637847 bp Feature: gene Location: 4076422-4076739 bp Ori: AST75706.1 Feature: domain Description: PRK10276 Location: 4076428-4076542 bp Feature: domain Description: PRK102 76 Location: 407642 8-4076542 bp Feature: domain Description: PRK10276 Location: 4076569-4076638 bp Feature: domain Description: PRK102 76 Location: 4076569-4076638 bp Feature: gene Location: 4076739-4076978 bp Feature: gene Location: 4077056-4078540 bp Ori: AST75708.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4077458-4078148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4077458-4078148 bp Feature: gene Location: 4078540-4078791 bp Feature: gene Location: 4078993-4079202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1902 (pfam08972), RVT-GII, PHA02515 (hypothetical protein; Provisional), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), XerC (COG4973), DinI (pfam06183), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), int (PHA02601)