myRT

myRT report for GCA_002249975.3_ASM224997v3

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Seq: CP022691.2 Klebsiella pneumoniae subsp. pneumoniae strain AUSMDU00008079 chromosome, complete genome (5449904 bp)
Overview 1 RT 1: 1389028-1394834 bp 2 RT 2: 1810179-1816650 bp 3 RT 3: 3109044-3114145 bp 4 RT 4: 3289408-3294772 bp 5 RT 5: 3632956-3638510 bp 6 RT 6: 4076369-4079821 bp Neighborhood of RT #1 [1389028, 1394863] HicA_toxin DUF1902 RVT-GII PHA02515 Phage_holin_8 Neighborhood of RT #2 [1810179, 1816664] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [3109044, 3114153] umuC PRK10276 RVT-GII XerC PinE Neighborhood of RT #4 [3289408, 3294828] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #5 [3632956, 3638530] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #6 [4076369, 4079877] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1389028-1389225 bp Ori: AST73225.1 Feature: domain Description: HicA_toxin Location: 1389055-1389211 bp Feature: domain Description: HicA_toxin Location: 1 389055-1 38921 1 bp Feature: gene Location: 1389229-1389486 bp Ori: AST73226.1 Feature: domain Description: DUF1902 Location: 1389271-1389457 bp Feature: domain Description: DUF1 902 Location: 1 389271 -1 389457 bp Feature: gene Location: 1389915-1391399 bp Ori: AST73227.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1390317-1391007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39031 7-1 391 007 bp Feature: gene Location: 1391935-1394196 bp Ori: AST73229.1 Feature: domain Description: PHA02515 Location: 1391947-1392286 bp Feature: domain Description: PHA0251 5 Location: 1 391 947-1 392286 bp Feature: gene Location: 1394459-1394863 bp Ori: AST73230.1 Feature: domain Description: Phage_holin_8 Location: 1394462-1394834 bp Feature: domain Description: Phage_holin_8 Location: 1 394462-1 394834 bp Feature: gene Location: 1810179-1811603 bp Ori: AST73579.1 Gene: sbcB Feature: domain Description: SbcB Location: 1810185-1811601 bp Feature: domain Description: SbcB Location: 1 81 01 85-1 81 1 601 bp Feature: gene Location: 1811778-1812947 bp Ori: AST73580.1 Gene: dacD Feature: domain Description: dacD Location: 1811787-1812942 bp Feature: domain Description: dacD Location: 1 81 1 787-1 81 2942 bp Feature: gene Location: 1813468-1814952 bp Ori: AST73582.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1813870-1814560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 3870-1 81 4560 bp Feature: gene Location: 1815034-1815507 bp Ori: AST73584.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1815037-1815496 bp Feature: domain Description: PRK1 001 6 Location: 1 81 5037-1 81 5496 bp Feature: gene Location: 1815606-1816664 bp Ori: AST73585.1 Feature: domain Description: YccC Location: 1815612-1816650 bp Feature: domain Description: YccC Location: 1 81 561 2-1 81 6650 bp Feature: gene Location: 3109044-3110309 bp Ori: AST74812.1 Gene: umuC Feature: domain Description: umuC Location: 3109047-3110307 bp Feature: domain Description: umuC Location: 31 09047-31 1 0307 bp Feature: gene Location: 3110311-3110730 bp Ori: AST74813.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3110314-3110725 bp Feature: domain Description: PRK1 0276 Location: 31 1 031 4-31 1 0725 bp Feature: gene Location: 3110810-3112294 bp Ori: AST74814.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3111212-3111902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 1 21 2-31 1 1 902 bp Feature: gene Location: 3113192-3113614 bp Ori: AST74816.1 Feature: domain Description: XerC Location: 3113228-3113573 bp Feature: domain Description: XerC Location: 31 1 3228-31 1 3573 bp Feature: gene Location: 3113692-3114153 bp Feature: domain Description: PinE Location: 3113695-3114145 bp Feature: domain Description: PinE Location: 31 1 3695-31 1 41 45 bp Feature: gene Location: 3289408-3290673 bp Ori: AST74995.1 Gene: umuC Feature: domain Description: umuC Location: 3289411-3290671 bp Feature: domain Description: umuC Location: 328941 1 -3290671 bp Feature: gene Location: 3290676-3291095 bp Ori: AST74996.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3290679-3291090 bp Feature: domain Description: PRK1 0276 Location: 3290679-3291 090 bp Feature: gene Location: 3291174-3292658 bp Ori: AST74997.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3291576-3292266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3291 576-3292266 bp Feature: gene Location: 3293276-3293518 bp Ori: AST74999.1 Feature: domain Description: DinI Location: 3293327-3293507 bp Feature: domain Description: DinI Location: 3293327-3293507 bp Feature: gene Location: 3293689-3294828 bp Ori: AST75000.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3293872-3294772 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3293872-3294772 bp Feature: gene Location: 3632956-3633834 bp Ori: AST75317.1 Feature: domain Description: Phage_CI_repr Location: 3632983-3633166 bp Feature: domain Description: Phage_CI_repr Location: 3632983-36331 66 bp Feature: domain Description: Phage_CI_repr Location: 3633295-3633487 bp Feature: domain Description: Phage_CI_repr Location: 3633295-3633487 bp Feature: domain Description: Phage_CI_C Location: 3633514-3633808 bp Feature: domain Description: Phage_CI_C Location: 363351 4-3633808 bp Feature: gene Location: 3633846-3634790 bp Feature: gene Location: 3634889-3636373 bp Ori: AST75319.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3635291-3635981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3635291 -3635981 bp Feature: gene Location: 3636792-3637844 bp Ori: AST75321.1 Feature: domain Description: int Location: 3636795-3637794 bp Feature: domain Description: int Location: 3636795-3637794 bp Feature: gene Location: 3637967-3638530 bp Ori: AST75322.1 Feature: domain Description: YbjK Location: 3637973-3638510 bp Feature: domain Description: YbjK Location: 3637973-363851 0 bp Feature: gene Location: 4076369-4076686 bp Ori: AST75706.1 Feature: domain Description: PRK10276 Location: 4076375-4076489 bp Feature: domain Description: PRK1 0276 Location: 4076375-4076489 bp Feature: domain Description: PRK10276 Location: 4076516-4076585 bp Feature: domain Description: PRK1 0276 Location: 407651 6-4076585 bp Feature: gene Location: 4076686-4076925 bp Feature: gene Location: 4077003-4078487 bp Ori: AST75708.2 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4077405-4078095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4077405-4078095 bp Feature: gene Location: 4078940-4079149 bp Feature: gene Location: 4079146-4079877 bp Ori: AST75711.1 Feature: domain Description: Laminin_G_3 Location: 4079467-4079821 bp Feature: domain Description: Laminin_G_3 Location: 4079467-4079821 bp Sorry, your browser does not 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Associated domains:myRT HicA_toxin (pfam07927), DUF1902 (pfam08972), RVT-GII, PHA02515 (hypothetical protein; Provisional), Phage_holin_8 (pfam16931), SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), XerC (COG4973), PinE (COG1961), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385)

Seq: CP022692.2 Klebsiella pneumoniae subsp. pneumoniae strain AUSMDU00008079 plasmid pAUSMDU00008079_01, complete sequence (207351 bp)
Overview 1 RT 1: 196515-201506 bp Neighborhood of RT #1 [196515, 201511] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 196515-196940 bp Ori: AST77369.1 Feature: domain Description: Antirestrict Location: 196650-196938 bp Feature: domain Description: Antirestrict Location: 196650-196938 bp Feature: gene Location: 197461-197691 bp Feature: gene Location: 197925-199409 bp Ori: AST77370.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198327-199017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19832 7-199017 bp Feature: gene Location: 199815-200240 bp Ori: AST77372.1 Gene: umuD Feature: domain Description: PRK10276 Location: 199818-200226 bp Feature: domain Description: PRK102 76 Location: 199818-2 002 2 6 bp Feature: gene Location: 200240-201511 bp Ori: AST77373.1 Gene: umuC Feature: domain Description: umuC Location: 200243-201506 bp Feature: domain Description: umuC Location: 2 002 43-2 01506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)