myRT

myRT report for GCA_002250055.1_ASM225005v1

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Seq: CP018866.1 Bacillus cohnii strain DSM 6307 chromosome, complete genome (4899141 bp)
Overview 1 RT 1: 174781-182026 bp 2 RT 2: 960463-965647 bp 3 RT 3: 1796837-1803653 bp 4 RT 4: 2249247-2254405 bp 5 RT 5: 3770382-3777501 bp Neighborhood of RT #1 [174781, 182028] YhgE TIGR03833 RVT-GII GIIM DUF5643 DUF5643 PRK05425 Neighborhood of RT #2 [960463, 965647] RND_mfp RND_mfp spxA RVT-GII GIIM R_switched_YjbE Neighborhood of RT #3 [1796837, 1803653] AcrB CspC RVT-GII GIIM Sm_multidrug_ex Neighborhood of RT #4 [2249247, 2254428] PaaX RAYT RVT-GII GIIM PaaY enACPred_II Neighborhood of RT #5 [3770382, 3777584] RVT-GII HNHc metallo-hydrolase-like_MBL-fold DEXQc_UvrD Feature: gene Location: 174781-176625 bp Ori: AST89910.1 Feature: domain Description: YhgE Location: 175513-176422 bp Feature: domain Description: YhgE Location: 1 7551 3-1 76422 bp Feature: gene Location: 176704-176898 bp Ori: AST89911.1 Feature: domain Description: TIGR03833 Location: 176713-176893 bp Feature: domain Description: TIGR03833 Location: 1 7671 3-1 76893 bp Feature: gene Location: 177463-178725 bp Ori: AST89912.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177676-178291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 77676-1 78291 bp Feature: domain Description: GIIM Note: maturase Location: 178351-178576 bp Feature: domain Description: GIIM Note: maturase Location: 1 78351 -1 78576 bp Feature: gene Location: 178865-180880 bp Ori: AST89913.1 Feature: domain Description: DUF5643 Location: 179708-179789 bp Feature: domain Description: DUF5643 Location: 1 79708-1 79789 bp Feature: domain Description: DUF5643 Location: 180110-180302 bp Feature: domain Description: DUF5643 Location: 1 801 1 0-1 80302 bp Feature: gene Location: 181027-182028 bp Ori: AST94189.1 Feature: domain Description: PRK05425 Location: 181048-182026 bp Feature: domain Description: PRK05425 Location: 1 81 048-1 82026 bp Feature: gene Location: 960463-961689 bp Ori: AST90609.1 Feature: domain Description: RND_mfp Location: 960568-960841 bp Feature: domain Description: RND_mfp Location: 960568-960841 bp Feature: domain Description: RND_mfp Location: 961039-961666 bp Feature: domain Description: RND_mfp Location: 961 039-961 666 bp Feature: gene Location: 962098-962496 bp Ori: AST90610.1 Feature: domain Description: spxA Location: 962101-962491 bp Feature: domain Description: spxA Location: 9621 01 -962491 bp Feature: gene Location: 963082-964344 bp Ori: AST90611.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963280-963901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963280-963901 bp Feature: domain Description: GIIM Note: maturase Location: 963949-964156 bp Feature: domain Description: GIIM Note: maturase Location: 963949-9641 56 bp Feature: gene Location: 964466-965131 bp Ori: AST90612.1 Feature: domain Description: R_switched_YjbE Location: 964493-965006 bp Feature: domain Description: R_switched_YjbE Location: 964493-965006 bp Feature: gene Location: 965369-965647 bp Feature: gene Location: 1796837-1799896 bp Ori: AST91377.1 Feature: domain Description: AcrB Location: 1796846-1799855 bp Feature: domain Description: AcrB Location: 1 796846-1 799855 bp Feature: gene Location: 1800150-1800350 bp Ori: AST91378.1 Feature: domain Description: CspC Location: 1800153-1800345 bp Feature: domain Description: CspC Location: 1 8001 53-1 800345 bp Feature: gene Location: 1800964-1802226 bp Ori: AST91379.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1801177-1801792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 801 1 77-1 801 792 bp Feature: domain Description: GIIM Note: maturase Location: 1801852-1802077 bp Feature: domain Description: GIIM Note: maturase Location: 1 801 852-1 802077 bp Feature: gene Location: 1802396-1802896 bp Ori: AST91380.1 Feature: domain Description: Sm_multidrug_ex Location: 1802465-1802813 bp Feature: domain Description: Sm_multidrug_ex Location: 1 802465-1 80281 3 bp Feature: gene Location: 1802913-1803653 bp Feature: gene Location: 2249247-2250122 bp Ori: AST91789.1 Feature: domain Description: PaaX Location: 2249253-2250114 bp Feature: domain Description: PaaX Location: 2249253-22501 1 4 bp Feature: gene Location: 2250269-2250751 bp Ori: AST91790.1 Feature: domain Description: RAYT Location: 2250287-2250668 bp Feature: domain Description: RAYT Location: 2250287-2250668 bp Feature: gene Location: 2250965-2252227 bp Ori: AST91791.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2251163-2251784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2251 1 63-2251 784 bp Feature: domain Description: GIIM Note: maturase Location: 2251832-2252039 bp Feature: domain Description: GIIM Note: maturase Location: 2251 832-2252039 bp Feature: gene Location: 2252888-2253400 bp Ori: AST91792.1 Feature: domain Description: PaaY Location: 2252894-2253392 bp Feature: domain Description: PaaY Location: 2252894-2253392 bp Feature: gene Location: 2253478-2254428 bp Ori: AST94319.1 Feature: domain Description: enACPred_II Location: 2253487-2254405 bp Feature: domain Description: enACPred_II Location: 2253487-2254405 bp Feature: gene Location: 3770382-3770930 bp Feature: gene Location: 3771061-3772809 bp Feature: gene Location: 3773265-3775028 bp Ori: AST94427.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3773523-3774222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3773523-3774222 bp Feature: domain Description: HNHc Note: nucleases Location: 3774777-3774915 bp Feature: domain Description: HNHc Note: nucleases Location: 3774777-377491 5 bp Feature: gene Location: 3776082-3776930 bp Ori: AST93211.1 Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 3776133-3776760 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 37761 33-3776760 bp Feature: gene Location: 3777261-3777584 bp Ori: AST93212.1 Feature: domain Description: DEXQc_UvrD Location: 3777303-3777501 bp Feature: domain Description: DEXQc_UvrD Location: 3777303-3777501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhgE (COG1511), TIGR03833 (conserved hypothetical protein), RVT-GII, GIIM (pfam08388), DUF5643 (pfam18705), PRK05425 (asparagine synthetase AsnA; Provisional), RND_mfp (TIGR01730), spxA (PRK13344), R_switched_YjbE (TIGR03717), AcrB (COG0841)
CspC (COG1278), Sm_multidrug_ex (pfam06695), PaaX (pfam07848), RAYT (COG1943), PaaY (TIGR02287), enACPred_II (TIGR03151), HNHc (smart00507), metallo-hydrolase-like_MBL-fold (cl23716), DEXQc_UvrD (cd17932)