myRT

myRT report for GCA_002250115.1_ASM225011v1

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Seq: CP019985.1 Bacillus clausii strain DSM 8716 chromosome, complete genome (4517459 bp)
Overview 1 RT 1: 52355-65303 bp 2 RT 2: 98453-106983 bp 3 RT 3: 804083-810988 bp 4 RT 4: 2364401-2369164 bp 5 RT 5: 2445335-2452099 bp 6 RT 6: 3274906-3281597 bp 7 RT 7: 4309301-4316462 bp Neighborhood of RT #1 [52355, 65323] BaeS OmpR RVT-GII GIIM RrgB_K2N_iso_D2 SGL B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat Gram_pos_anchor Sortase_D_1 Neighborhood of RT #2 [98453, 107246] HK_WalK YesM PRK10658 RVT-GII GIIM MFS_FucP_MFSD4_like NagC Neighborhood of RT #3 [804083, 811005] Arch_glmU LbetaH LysM 3D RVT-GII GIIM NagC UgpB DUF3502 Neighborhood of RT #4 [2364401, 2369184] YeaQ Acetyltransf_1 RVT-GII GIIM HipB PRK09943 AzlC Neighborhood of RT #5 [2445335, 2452131] PTSIIA_gutA DeoR RVT-GII GIIM YdiL ZntA ZntA Neighborhood of RT #6 [3274906, 3281659] AceF PRK06416 RVT-GII GIIM DppD AppF Neighborhood of RT #7 [4309301, 4317415] CstA CstA RVT-GII PRK05222 SEC-C Feature: gene Location: 52355-53287 bp Ori: AST94523.1 Feature: domain Description: BaeS Location: 52412-53276 bp Feature: domain Description: BaeS Location: 5241 2-53276 bp Feature: gene Location: 53284-53979 bp Ori: AST94524.1 Feature: domain Description: OmpR Location: 53293-53971 bp Feature: domain Description: OmpR Location: 53293-53971 bp Feature: gene Location: 54201-55460 bp Ori: AST94525.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54396-55014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54396-5501 4 bp Feature: domain Description: GIIM Note: maturase Location: 55065-55284 bp Feature: domain Description: GIIM Note: maturase Location: 55065-55284 bp Feature: gene Location: 56054-64648 bp Ori: AST94526.1 Feature: domain Description: RrgB_K2N_iso_D2 Location: 56213-56543 bp Feature: domain Description: RrgB_K2N_iso_D2 Location: 5621 3-56543 bp Feature: domain Description: SGL Location: 57053-57371 bp Feature: domain Description: SGL Location: 57053-57371 bp Feature: domain Description: B_ant_repeat Location: 57671-57821 bp Feature: domain Description: B_ant_repeat Location: 57671 -57821 bp Feature: domain Description: B_ant_repeat Location: 58103-58223 bp Feature: domain Description: B_ant_repeat Location: 581 03-58223 bp Feature: domain Description: B_ant_repeat Location: 59093-59219 bp Feature: domain Description: B_ant_repeat Location: 59093-5921 9 bp Feature: domain Description: B_ant_repeat Location: 59552-59702 bp Feature: domain Description: B_ant_repeat Location: 59552-59702 bp Feature: domain Description: B_ant_repeat Location: 59972-60116 bp Feature: domain Description: B_ant_repeat Location: 59972-601 1 6 bp Feature: domain Description: B_ant_repeat Location: 60383-60533 bp Feature: domain Description: B_ant_repeat Location: 60383-60533 bp Feature: domain Description: B_ant_repeat Location: 60821-60947 bp Feature: domain Description: B_ant_repeat Location: 60821 -60947 bp Feature: domain Description: B_ant_repeat Location: 61214-61364 bp Feature: domain Description: B_ant_repeat Location: 61 21 4-61 364 bp Feature: domain Description: B_ant_repeat Location: 61652-61781 bp Feature: domain Description: B_ant_repeat Location: 61 652-61 781 bp Feature: domain Description: B_ant_repeat Location: 62048-62174 bp Feature: domain Description: B_ant_repeat Location: 62048-621 74 bp Feature: domain Description: B_ant_repeat Location: 62444-62570 bp Feature: domain Description: B_ant_repeat Location: 62444-62570 bp Feature: domain Description: B_ant_repeat Location: 62837-62987 bp Feature: domain Description: B_ant_repeat Location: 62837-62987 bp Feature: domain Description: B_ant_repeat Location: 63266-63404 bp Feature: domain Description: B_ant_repeat Location: 63266-63404 bp Feature: domain Description: B_ant_repeat Location: 63671-63800 bp Feature: domain Description: B_ant_repeat Location: 63671 -63800 bp Feature: domain Description: B_ant_repeat Location: 64067-64196 bp Feature: domain Description: B_ant_repeat Location: 64067-641 96 bp Feature: domain Description: Gram_pos_anchor Location: 64532-64640 bp Feature: domain Description: Gram_pos_anchor Location: 64532-64640 bp Feature: gene Location: 64763-65323 bp Ori: AST94527.1 Feature: domain Description: Sortase_D_1 Location: 64931-65303 bp Feature: domain Description: Sortase_D_1 Location: 64931 -65303 bp Feature: gene Location: 98453-100252 bp Ori: AST94556.1 Feature: domain Description: HK_WalK Location: 98507-98732 bp Feature: domain Description: HK_WalK Location: 98507-98732 bp Feature: domain Description: YesM Location: 98984-100241 bp Feature: domain Description: YesM Location: 98984-1 00241 bp Feature: gene Location: 100705-103008 bp Ori: AST94557.1 Feature: domain Description: PRK10658 Location: 100708-102694 bp Feature: domain Description: PRK1 0658 Location: 1 00708-1 02694 bp Feature: gene Location: 103083-104342 bp Ori: AST94558.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103278-103896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 03278-1 03896 bp Feature: domain Description: GIIM Note: maturase Location: 103947-104166 bp Feature: domain Description: GIIM Note: maturase Location: 1 03947-1 041 66 bp Feature: gene Location: 104997-106220 bp Ori: AST94559.1 Feature: domain Description: MFS_FucP_MFSD4_like Location: 105024-106143 bp Feature: domain Description: MFS_FucP_MFSD4_like Location: 1 05024-1 061 43 bp Feature: gene Location: 106242-107246 bp Ori: AST94560.1 Feature: domain Description: NagC Location: 106497-106983 bp Feature: domain Description: NagC Location: 1 06497-1 06983 bp Feature: gene Location: 804083-805435 bp Ori: AST95166.1 Feature: domain Description: Arch_glmU Location: 804086-804950 bp Feature: domain Description: Arch_glmU Location: 804086-804950 bp Feature: domain Description: LbetaH Location: 804983-805349 bp Feature: domain Description: LbetaH Location: 804983-805349 bp Feature: gene Location: 806048-806629 bp Ori: AST95167.1 Feature: domain Description: LysM Location: 806117-806243 bp Feature: domain Description: LysM Location: 8061 1 7-806243 bp Feature: domain Description: 3D Location: 806312-806624 bp Feature: domain Description: 3D Location: 80631 2-806624 bp Feature: gene Location: 806705-807964 bp Ori: AST95168.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806900-807518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806900-80751 8 bp Feature: domain Description: GIIM Note: maturase Location: 807569-807788 bp Feature: domain Description: GIIM Note: maturase Location: 807569-807788 bp Feature: gene Location: 808619-809581 bp Ori: AST95169.1 Feature: domain Description: NagC Location: 808685-809558 bp Feature: domain Description: NagC Location: 808685-809558 bp Feature: gene Location: 809557-811005 bp Ori: AST98523.1 Feature: domain Description: UgpB Location: 809560-810571 bp Feature: domain Description: UgpB Location: 809560-81 0571 bp Feature: domain Description: DUF3502 Location: 810601-810988 bp Feature: domain Description: DUF3502 Location: 81 0601 -81 0988 bp Feature: gene Location: 2364401-2364649 bp Ori: AST96487.1 Feature: domain Description: YeaQ Location: 2364404-2364632 bp Feature: domain Description: YeaQ Location: 2364404-2364632 bp Feature: gene Location: 2365393-2365857 bp Ori: AST96488.1 Feature: domain Description: Acetyltransf_1 Location: 2365483-2365762 bp Feature: domain Description: Acetyltransf_1 Location: 2365483-2365762 bp Feature: gene Location: 2366483-2367742 bp Ori: AST96489.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2366678-2367296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2366678-2367296 bp Feature: domain Description: GIIM Note: maturase Location: 2367347-2367566 bp Feature: domain Description: GIIM Note: maturase Location: 2367347-2367566 bp Feature: gene Location: 2367817-2368398 bp Ori: AST98607.1 Feature: domain Description: HipB Location: 2367874-2368117 bp Feature: domain Description: HipB Location: 2367874-23681 1 7 bp Feature: domain Description: PRK09943 Location: 2368231-2368357 bp Feature: domain Description: PRK09943 Location: 2368231 -2368357 bp Feature: gene Location: 2368492-2369184 bp Ori: AST96490.1 Feature: domain Description: AzlC Location: 2368519-2369164 bp Feature: domain Description: AzlC Location: 236851 9-23691 64 bp Feature: gene Location: 2445335-2445691 bp Ori: AST96561.1 Feature: domain Description: PTSIIA_gutA Location: 2445338-2445680 bp Feature: domain Description: PTSIIA_gutA Location: 2445338-2445680 bp Feature: gene Location: 2445745-2446683 bp Ori: AST96562.1 Feature: domain Description: DeoR Location: 2445763-2446678 bp Feature: domain Description: DeoR Location: 2445763-2446678 bp Feature: gene Location: 2447279-2448538 bp Ori: AST96563.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2447474-2448092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2447474-2448092 bp Feature: domain Description: GIIM Note: maturase Location: 2448143-2448362 bp Feature: domain Description: GIIM Note: maturase Location: 24481 43-2448362 bp Feature: gene Location: 2448680-2449570 bp Ori: AST96564.1 Feature: domain Description: YdiL Location: 2448695-2449433 bp Feature: domain Description: YdiL Location: 2448695-2449433 bp Feature: gene Location: 2449702-2452131 bp Ori: AST96565.1 Feature: domain Description: ZntA Location: 2449714-2449915 bp Feature: domain Description: ZntA Location: 244971 4-244991 5 bp Feature: domain Description: ZntA Location: 2449921-2452099 bp Feature: domain Description: ZntA Location: 2449921 -2452099 bp Feature: gene Location: 3274906-3276183 bp Ori: AST97358.1 Feature: domain Description: AceF Location: 3274915-3276178 bp Feature: domain Description: AceF Location: 327491 5-32761 78 bp Feature: gene Location: 3276187-3277593 bp Ori: AST97359.1 Feature: domain Description: PRK06416 Location: 3276208-3277588 bp Feature: domain Description: PRK0641 6 Location: 3276208-3277588 bp Feature: gene Location: 3278191-3279450 bp Ori: AST97360.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3278386-3279004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3278386-3279004 bp Feature: domain Description: GIIM Note: maturase Location: 3279055-3279274 bp Feature: domain Description: GIIM Note: maturase Location: 3279055-3279274 bp Feature: gene Location: 3279651-3280667 bp Ori: AST97361.1 Feature: domain Description: DppD Location: 3279666-3280611 bp Feature: domain Description: DppD Location: 3279666-328061 1 bp Feature: gene Location: 3280667-3281659 bp Ori: AST97362.1 Feature: domain Description: AppF Location: 3280676-3281597 bp Feature: domain Description: AppF Location: 3280676-3281 597 bp Feature: gene Location: 4309301-4309801 bp Feature: gene Location: 4309817-4311457 bp Ori: AST98318.1 Feature: domain Description: CstA Location: 4309820-4310864 bp Feature: domain Description: CstA Location: 4309820-431 0864 bp Feature: domain Description: CstA Location: 4310894-4311419 bp Feature: domain Description: CstA Location: 431 0894-431 1 41 9 bp Feature: gene Location: 4311510-4312768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4311705-4312071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 1 705-431 2071 bp Feature: gene Location: 4313382-4315676 bp Ori: AST98319.1 Feature: domain Description: PRK05222 Location: 4313397-4315659 bp Feature: domain Description: PRK05222 Location: 431 3397-431 5659 bp Feature: gene Location: 4316399-4317415 bp Ori: AST98320.1 Feature: domain Description: SEC-C Location: 4316411-4316462 bp Feature: domain Description: SEC-C Location: 431 641 1 -431 6462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), OmpR (COG0745), RVT-GII, GIIM (pfam08388), RrgB_K2N_iso_D2 (TIGR04226), SGL (pfam08450), B_ant_repeat (TIGR01451), Gram_pos_anchor (pfam00746), Sortase_D_1 (cd05828), HK_WalK (NF033092)
YesM (COG2972), PRK10658 (putative alpha-glucosidase; Provisional), MFS_FucP_MFSD4_like (cd17333), NagC (COG1940), Arch_glmU (TIGR03992), LbetaH (cl00160), LysM (smart00257), 3D (pfam06725), UgpB (COG1653), DUF3502 (pfam12010)
YeaQ (COG2261), Acetyltransf_1 (pfam00583), HipB (COG1396), PRK09943 (HTH-type transcriptional regulator PuuR), AzlC (pfam03591), PTSIIA_gutA (pfam03829), DeoR (COG2390), YdiL (COG1266), ZntA (COG2217), AceF (COG0508)
PRK06416 (dihydrolipoamide dehydrogenase; Reviewed), DppD (COG0444), AppF (COG4608), CstA (pfam02554), PRK05222 (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional), SEC-C (pfam02810)