myRT

myRT report for GCA_002251875.3_ASM225187v3

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Seq: CP041093.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH01 plasmid unnamed1, complete sequence (250990 bp)
Overview 1 RT 1: 30276-34632 bp 2 RT 2: 150838-154698 bp Neighborhood of RT #1 [30276, 34646] cas7_csf2 RVT-GII PRK10276 Neighborhood of RT #2 [150838, 154698] HHA RVT-GII INT_Cre_C Feature: gene Location: 30276-31067 bp Ori: QDJ80093.1 Feature: domain Description: cas7_csf2 Location: 30597-31011 bp Feature: domain Description: cas7_csf2 Location: 30597-31 01 1 bp Feature: gene Location: 32403-32654 bp Feature: gene Location: 32654-34138 bp Ori: QDJ79883.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33056-33746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33056-33746 bp Feature: gene Location: 34054-34233 bp Feature: gene Location: 34224-34646 bp Ori: QDJ79885.1 Gene: umuD Feature: domain Description: PRK10276 Location: 34230-34632 bp Feature: domain Description: PRK1 0276 Location: 34230-34632 bp Feature: gene Location: 150838-151092 bp Ori: QDJ79994.1 Feature: domain Description: HHA Location: 150889-151072 bp Feature: domain Description: HHA Location: 1 50889-1 51 072 bp Feature: gene Location: 151358-151609 bp Feature: gene Location: 151609-153093 bp Ori: QDJ79996.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152011-152701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5201 1 -1 52701 bp Feature: gene Location: 153179-154315 bp Ori: QDJ79997.1 Feature: domain Description: INT_Cre_C Location: 153602-154256 bp Feature: domain Description: INT_Cre_C Location: 1 53602-1 54256 bp Feature: gene Location: 154381-154698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas7_csf2 (TIGR03115), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), HHA (pfam05321), INT_Cre_C (cd00799)

Seq: CP041092.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH01 chromosome, complete genome (5215652 bp)
Overview 1 RT 1: 1752970-1757842 bp 2 RT 2: 3058510-3061341 bp 3 RT 3: 3860134-3863413 bp Neighborhood of RT #1 [1752970, 1757856] dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3058510, 3061352] PRK10276 RVT-GII DinI Neighborhood of RT #3 [3860134, 3863413] RVT-GII Feature: gene Location: 1752970-1754139 bp Ori: QDJ76543.1 Gene: dacD Feature: domain Description: dacD Location: 1752979-1754134 bp Feature: domain Description: dacD Location: 1752 979-1754134 bp Feature: gene Location: 1754409-1754660 bp Feature: gene Location: 1754660-1756144 bp Ori: QDJ76545.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1755062-1755752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1755062 -1755752 bp Feature: gene Location: 1756226-1756699 bp Ori: QDJ76546.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1756229-1756688 bp Feature: domain Description: PRK10016 Location: 17562 2 9-1756688 bp Feature: gene Location: 1756798-1757856 bp Ori: QDJ76547.1 Feature: domain Description: YccC Location: 1756804-1757842 bp Feature: domain Description: YccC Location: 1756804-1757842 bp Feature: gene Location: 3058510-3058929 bp Ori: QDJ77741.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3058513-3058924 bp Feature: domain Description: PRK102 76 Location: 3058513-305892 4 bp Feature: gene Location: 3058907-3059092 bp Feature: gene Location: 3059008-3060492 bp Ori: QDJ77743.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059410-3060100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059410-3060100 bp Feature: gene Location: 3060492-3060743 bp Feature: gene Location: 3061110-3061352 bp Ori: QDJ77745.1 Feature: domain Description: DinI Location: 3061161-3061341 bp Feature: domain Description: DinI Location: 3061161-3061341 bp Feature: gene Location: 3860134-3860373 bp Feature: gene Location: 3860387-3860458 bp Feature: gene Location: 3860451-3861935 bp Ori: QDJ78422.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3860853-3861543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3860853-3861543 bp Feature: gene Location: 3861935-3862186 bp Feature: gene Location: 3862664-3863413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183)

Seq: CP041094.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH01 plasmid unnamed2, complete sequence (168755 bp)
Overview 1 RT 1: 71837-78221 bp Neighborhood of RT #1 [71837, 78221] PRK15235 AfaD-like RVT-GII Feature: gene Location: 71837-74284 bp Ori: QDJ80144.1 Feature: domain Description: PRK15235 Location: 71843-74282 bp Feature: domain Description: PRK1523 5 Location: 71843 -74282 bp Feature: gene Location: 74281-74730 bp Ori: QDJ80145.1 Feature: domain Description: AfaD-like Location: 74377-74716 bp Feature: domain Description: AfaD-like Location: 743 77-74716 bp Feature: gene Location: 76024-77487 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76405-77095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76405-77095 bp Feature: gene Location: 77719-77949 bp Feature: gene Location: 78015-78221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15235 (outer membrane fimbrial usher protein SefC; Provisional), AfaD-like (cd18776), RVT-GII