myRT

myRT report for GCA_002257765.2_ASM225776v2

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Seq: CP036361.1 Klebsiella pneumoniae strain WCHKP2080 chromosome, complete genome (5444983 bp)
Overview 1 RT 1: 1243982-1248962 bp 2 RT 2: 1408114-1410800 bp 3 RT 3: 1868392-1873264 bp 4 RT 4: 1889782-1896044 bp 5 RT 5: 3133400-3137538 bp 6 RT 6: 3285792-3289891 bp 7 RT 7: 3358624-3362886 bp 8 RT 8: 3683375-3688213 bp Neighborhood of RT #1 [1243982, 1248962] Phage_GPA RVT-GII Neighborhood of RT #2 [1408114, 1410800] DinI RVT-GII Neighborhood of RT #3 [1868392, 1873278] dacD RVT-GII PRK10016 YccC Neighborhood of RT #4 [1889782, 1896044] STKc_PknB_like RVT-Retrons AAA_15 Neighborhood of RT #5 [3133400, 3137538] umuC PRK10276 RVT-GII Neighborhood of RT #6 [3285792, 3289902] umuC PRK10276 RVT-GII DinI Neighborhood of RT #7 [3358624, 3362924] PRK10597 RVT-GII PRK05318 Neighborhood of RT #8 [3683375, 3688263] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 1243982-1246366 bp Ori: QBH47941.1 Feature: domain Description: Phage_GPA Location: 1244546-1245512 bp Feature: domain Description: Phage_GPA Location: 1 244546-1 24551 2 bp Feature: gene Location: 1246596-1246847 bp Feature: gene Location: 1246847-1248331 bp Ori: QBH47943.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1247249-1247939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 247249-1 247939 bp Feature: gene Location: 1248428-1248766 bp Feature: gene Location: 1248759-1248962 bp Feature: gene Location: 1408114-1408347 bp Ori: QBH48101.1 Feature: domain Description: DinI Location: 1408159-1408342 bp Feature: domain Description: DinI Location: 1 4081 59-1 408342 bp Feature: gene Location: 1408359-1408547 bp Feature: gene Location: 1408655-1410139 bp Ori: QBH48103.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1409057-1409747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 409057-1 409747 bp Feature: gene Location: 1410139-1410390 bp Feature: gene Location: 1410543-1410800 bp Feature: gene Location: 1868392-1869561 bp Ori: QBH48491.1 Gene: dacD Feature: domain Description: dacD Location: 1868401-1869556 bp Feature: domain Description: dacD Location: 1 868401 -1 869556 bp Feature: gene Location: 1869831-1870082 bp Feature: gene Location: 1870082-1871566 bp Ori: QBH48493.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1870484-1871174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 870484-1 871 1 74 bp Feature: gene Location: 1871648-1872121 bp Ori: QBH48494.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1871651-1872110 bp Feature: domain Description: PRK1 001 6 Location: 1 871 651 -1 8721 1 0 bp Feature: gene Location: 1872220-1873278 bp Ori: QBH48495.1 Feature: domain Description: YccC Location: 1872226-1873264 bp Feature: domain Description: YccC Location: 1 872226-1 873264 bp Feature: gene Location: 1889782-1890885 bp Ori: QBH48513.1 Feature: domain Description: STKc_PknB_like Location: 1889914-1890355 bp Feature: domain Description: STKc_PknB_like Location: 1 88991 4-1 890355 bp Feature: gene Location: 1890955-1891197 bp Feature: gene Location: 1891444-1892544 bp Ori: QBH48514.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1891624-1892158 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 891 624-1 8921 58 bp Feature: gene Location: 1892659-1894905 bp Ori: QBH48515.1 Feature: domain Description: AAA_15 Location: 1892662-1893670 bp Feature: domain Description: AAA_1 5 Location: 1 892662-1 893670 bp Feature: gene Location: 1895814-1896044 bp Feature: gene Location: 3133400-3134665 bp Ori: QBH49661.1 Gene: umuC Feature: domain Description: umuC Location: 3133403-3134663 bp Feature: domain Description: umuC Location: 31 33403-31 34663 bp Feature: gene Location: 3134667-3135086 bp Ori: QBH49662.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3134670-3135081 bp Feature: domain Description: PRK1 0276 Location: 31 34670-31 35081 bp Feature: gene Location: 3135166-3136650 bp Ori: QBH49663.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3135568-3136258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 35568-31 36258 bp Feature: gene Location: 3136650-3136901 bp Feature: gene Location: 3137449-3137538 bp Feature: gene Location: 3285792-3287057 bp Ori: QBH49813.1 Gene: umuC Feature: domain Description: umuC Location: 3285795-3287055 bp Feature: domain Description: umuC Location: 3285795-3287055 bp Feature: gene Location: 3287060-3287479 bp Ori: QBH49814.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3287063-3287474 bp Feature: domain Description: PRK1 0276 Location: 3287063-3287474 bp Feature: gene Location: 3287558-3289042 bp Ori: QBH49815.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3287960-3288650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3287960-3288650 bp Feature: gene Location: 3289042-3289293 bp Feature: gene Location: 3289660-3289902 bp Ori: QBH49817.1 Feature: domain Description: DinI Location: 3289711-3289891 bp Feature: domain Description: DinI Location: 328971 1 -3289891 bp Feature: gene Location: 3358624-3358914 bp Feature: gene Location: 3358926-3359159 bp Ori: QBH49888.1 Feature: domain Description: PRK10597 Location: 3358929-3359154 bp Feature: domain Description: PRK1 0597 Location: 3358929-33591 54 bp Feature: gene Location: 3359238-3360722 bp Ori: QBH49889.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3359640-3360330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3359640-3360330 bp Feature: gene Location: 3360722-3360973 bp Feature: gene Location: 3361563-3362924 bp Ori: QBH49891.1 Feature: domain Description: PRK05318 Location: 3361587-3362886 bp Feature: domain Description: PRK0531 8 Location: 3361 587-3362886 bp Feature: gene Location: 3683375-3684253 bp Ori: QBH51915.1 Feature: domain Description: Phage_CI_repr Location: 3683402-3683585 bp Feature: domain Description: Phage_CI_repr Location: 3683402-3683585 bp Feature: domain Description: Phage_CI_repr Location: 3683714-3683906 bp Feature: domain Description: Phage_CI_repr Location: 368371 4-3683906 bp Feature: domain Description: Phage_CI_C Location: 3683933-3684227 bp Feature: domain Description: Phage_CI_C Location: 3683933-3684227 bp Feature: gene Location: 3684265-3685209 bp Feature: gene Location: 3685308-3686792 bp Ori: QBH50183.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3685710-3686400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368571 0-3686400 bp Feature: gene Location: 3686792-3687043 bp Feature: gene Location: 3687211-3688263 bp Ori: QBH50185.1 Feature: domain Description: int Location: 3687214-3688213 bp Feature: domain Description: int Location: 368721 4-368821 3 bp Sorry, your browser does not 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Associated domains:myRT Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175), umuC (PRK03609)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PRK10597 (DNA damage-inducible protein I; Provisional), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)

Seq: CP036362.1 Klebsiella pneumoniae strain WCHKP2080 plasmid pKPC2_095080, complete sequence (120195 bp)
Overview 1 RT 1: 89221-93303 bp Neighborhood of RT #1 [89221, 93440] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 89221-89652 bp Ori: QBH52070.1 Gene: umuD Feature: domain Description: PRK10276 Location: 89272-89635 bp Feature: domain Description: PRK102 76 Location: 892 72 -89635 bp Feature: gene Location: 89811-90062 bp Feature: gene Location: 90062-91546 bp Ori: QBH52072.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90464-91154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90464-91154 bp Feature: gene Location: 91795-92766 bp Ori: QBH52073.1 Feature: domain Description: StbA Location: 91798-92743 bp Feature: domain Description: StbA Location: 91798-92 743 bp Feature: gene Location: 92769-93440 bp Ori: QBH52074.1 Feature: domain Description: Plasmid_stab_B Location: 92784-92991 bp Feature: domain Description: Plasmid_stab_B Location: 92 784-92 991 bp Feature: domain Description: Plasmid_stab_B Location: 93096-93303 bp Feature: domain Description: Plasmid_stab_B Location: 93096-93303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)