myRT

myRT report for GCA_002269295.1_ASM226929v1

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Seq: CP022882.1 Klebsiella pneumoniae strain 911021 chromosome, complete genome (5456357 bp)
Overview 1 RT 1: 192204-196733 bp 2 RT 2: 344561-348660 bp 3 RT 3: 417393-421655 bp 4 RT 4: 733898-739802 bp 5 RT 5: 824102-828445 bp 6 RT 6: 3746798-3751683 bp 7 RT 7: 3910840-3913616 bp 8 RT 8: 4363897-4367615 bp 9 RT 9: 4384510-4390772 bp Neighborhood of RT #1 [192204, 196774] umuC PRK10276 RVT-GII XerC Neighborhood of RT #2 [344561, 348671] umuC PRK10276 RVT-GII DinI Neighborhood of RT #3 [417393, 421693] PRK10597 RVT-GII PRK05318 Neighborhood of RT #4 [733898, 739852] AIPR IS5 RVT-GII int Neighborhood of RT #5 [824102, 828445] UvrB RVT-GII Neighborhood of RT #6 [3746798, 3751688] Phage_GPA RVT-GII DinI Neighborhood of RT #7 [3910840, 3913616] RVT-GII Neighborhood of RT #8 [4363897, 4367626] dacD RVT-GII PRK10016 Neighborhood of RT #9 [4384510, 4390772] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 192204-193469 bp Ori: ASV23676.1 Feature: domain Description: umuC Location: 192207-193467 bp Feature: domain Description: umuC Location: 1 92207-1 93467 bp Feature: gene Location: 193471-193890 bp Ori: ASV23677.1 Feature: domain Description: PRK10276 Location: 193474-193885 bp Feature: domain Description: PRK1 0276 Location: 1 93474-1 93885 bp Feature: gene Location: 193970-195454 bp Ori: ASV23678.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194372-195062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 94372-1 95062 bp Feature: gene Location: 195454-195705 bp Feature: gene Location: 196352-196774 bp Ori: ASV23680.1 Feature: domain Description: XerC Location: 196388-196733 bp Feature: domain Description: XerC Location: 1 96388-1 96733 bp Feature: gene Location: 344561-345826 bp Ori: ASV23823.1 Feature: domain Description: umuC Location: 344564-345824 bp Feature: domain Description: umuC Location: 344564-345824 bp Feature: gene Location: 345829-346248 bp Ori: ASV23824.1 Feature: domain Description: PRK10276 Location: 345832-346243 bp Feature: domain Description: PRK1 0276 Location: 345832-346243 bp Feature: gene Location: 346327-347811 bp Ori: ASV23825.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 346729-347419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 346729-34741 9 bp Feature: gene Location: 347811-348062 bp Feature: gene Location: 348429-348671 bp Ori: ASV23827.1 Feature: domain Description: DinI Location: 348480-348660 bp Feature: domain Description: DinI Location: 348480-348660 bp Feature: gene Location: 417393-417683 bp Feature: gene Location: 417695-417928 bp Ori: ASV23899.1 Feature: domain Description: PRK10597 Location: 417698-417923 bp Feature: domain Description: PRK1 0597 Location: 41 7698-41 7923 bp Feature: gene Location: 418007-419491 bp Ori: ASV23900.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418409-419099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 8409-41 9099 bp Feature: gene Location: 419491-419742 bp Feature: gene Location: 420332-421693 bp Ori: ASV23902.1 Feature: domain Description: PRK05318 Location: 420356-421655 bp Feature: domain Description: PRK0531 8 Location: 420356-421 655 bp Feature: gene Location: 733898-735640 bp Ori: ASV24187.1 Feature: domain Description: AIPR Location: 734597-735263 bp Feature: domain Description: AIPR Location: 734597-735263 bp Feature: gene Location: 735988-736968 bp Ori: ASV24188.1 Feature: domain Description: IS5 Location: 736177-736954 bp Feature: domain Description: IS5 Location: 7361 77-736954 bp Feature: gene Location: 737068-738381 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 737470-738160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 737470-7381 60 bp Feature: gene Location: 738381-738632 bp Feature: gene Location: 738800-739852 bp Ori: ASV24190.1 Feature: domain Description: int Location: 738803-739802 bp Feature: domain Description: int Location: 738803-739802 bp Feature: gene Location: 824102-826123 bp Ori: ASV24268.1 Gene: uvrB Feature: domain Description: UvrB Location: 824108-826109 bp Feature: domain Description: UvrB Location: 8241 08-8261 09 bp Feature: gene Location: 826334-826585 bp Feature: gene Location: 826585-828069 bp Ori: ASV24270.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826987-827677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826987-827677 bp Feature: gene Location: 828015-828203 bp Feature: gene Location: 828266-828445 bp Feature: gene Location: 3746798-3749182 bp Ori: ASV26952.1 Feature: domain Description: Phage_GPA Location: 3747362-3748328 bp Feature: domain Description: Phage_GPA Location: 3747362-3748328 bp Feature: gene Location: 3749412-3749663 bp Feature: gene Location: 3749663-3751147 bp Ori: ASV26954.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750065-3750755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750065-3750755 bp Feature: gene Location: 3751255-3751443 bp Feature: gene Location: 3751455-3751688 bp Ori: ASV26955.1 Feature: domain Description: DinI Location: 3751500-3751683 bp Feature: domain Description: DinI Location: 3751 500-3751 683 bp Feature: gene Location: 3910840-3911043 bp Feature: gene Location: 3911036-3911374 bp Feature: gene Location: 3911471-3912955 bp Ori: ASV27111.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3911873-3912563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391 1 873-391 2563 bp Feature: gene Location: 3912955-3913206 bp Feature: gene Location: 3913359-3913616 bp Feature: gene Location: 4363897-4365066 bp Ori: ASV27494.1 Feature: domain Description: dacD Location: 4363906-4365061 bp Feature: domain Description: dacD Location: 4363906-4365061 bp Feature: gene Location: 4365336-4365587 bp Feature: gene Location: 4365587-4367071 bp Ori: ASV27496.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4365989-4366679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4365989-4366679 bp Feature: gene Location: 4367017-4367244 bp Feature: gene Location: 4367153-4367626 bp Ori: ASV27498.1 Feature: domain Description: PRK10016 Location: 4367156-4367615 bp Feature: domain Description: PRK1 001 6 Location: 43671 56-436761 5 bp Feature: gene Location: 4384510-4385613 bp Ori: ASV27519.1 Feature: domain Description: STKc_PknB_like Location: 4384642-4385083 bp Feature: domain Description: STKc_PknB_like Location: 4384642-4385083 bp Feature: gene Location: 4385683-4385925 bp Feature: gene Location: 4386172-4387272 bp Ori: ASV27520.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4386355-4386883 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4386355-4386883 bp Feature: gene Location: 4387387-4389663 bp Ori: ASV27521.1 Feature: domain Description: AAA_15 Location: 4387420-4388428 bp Feature: domain Description: AAA_1 5 Location: 4387420-4388428 bp Feature: gene Location: 4390542-4390772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, XerC (COG4973), DinI (pfam06183), PRK10597 (DNA damage-inducible protein I; Provisional), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), AIPR (pfam10592), IS5 (COG3039), int (PHA02601)
UvrB (pfam12344), Phage_GPA (pfam05840), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)