myRT

myRT report for GCA_002278055.1_ASM227805v1

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Seq: CP022997.1 Klebsiella pneumoniae strain 721005 chromosome, complete genome (5475860 bp)
Overview 1 RT 1: 91456-95174 bp 2 RT 2: 112069-118331 bp 3 RT 3: 1319743-1322722 bp 4 RT 4: 1399897-1404004 bp 5 RT 5: 1573939-1578038 bp 6 RT 6: 1646771-1651033 bp 7 RT 7: 1809986-1813348 bp 8 RT 8: 1974982-1979820 bp 9 RT 9: 4949776-4954661 bp 10 RT 10: 5114790-5117958 bp Neighborhood of RT #1 [91456, 95185] dacD RVT-GII PRK10016 Neighborhood of RT #2 [112069, 118331] STKc_PknB_like RVT-Retrons AAA_15 Neighborhood of RT #3 [1319743, 1322722] PRK10597 RVT-GII Neighborhood of RT #4 [1399897, 1404084] umuC PRK10276 RVT-GII cupin_WbuC Neighborhood of RT #5 [1573939, 1578049] umuC PRK10276 RVT-GII DinI Neighborhood of RT #6 [1646771, 1651071] PRK10597 RVT-GII PRK05318 Neighborhood of RT #7 [1809986, 1813350] TfoX_N TfoX_C RVT-GII sula Neighborhood of RT #8 [1974982, 1979870] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Neighborhood of RT #9 [4949776, 4954666] Phage_GPA RVT-GII DinI Neighborhood of RT #10 [5114790, 5118032] RVT-GII Terminase_2 Feature: gene Location: 91456-92625 bp Ori: ASV88871.1 Feature: domain Description: dacD Location: 91465-92620 bp Feature: domain Description: dacD Location: 91 465-92620 bp Feature: gene Location: 92895-93146 bp Feature: gene Location: 93146-94630 bp Ori: ASV88873.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93548-94238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93548-94238 bp Feature: gene Location: 94576-94803 bp Feature: gene Location: 94712-95185 bp Ori: ASV88875.1 Feature: domain Description: PRK10016 Location: 94715-95174 bp Feature: domain Description: PRK1 001 6 Location: 9471 5-951 74 bp Feature: gene Location: 112069-113172 bp Ori: ASV88896.1 Feature: domain Description: STKc_PknB_like Location: 112201-112642 bp Feature: domain Description: STKc_PknB_like Location: 1 1 2201 -1 1 2642 bp Feature: gene Location: 113242-113484 bp Feature: gene Location: 113731-114831 bp Ori: ASV88897.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 113911-114445 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 391 1 -1 1 4445 bp Feature: gene Location: 114946-117222 bp Ori: ASV88898.1 Feature: domain Description: AAA_15 Location: 114979-115987 bp Feature: domain Description: AAA_1 5 Location: 1 1 4979-1 1 5987 bp Feature: gene Location: 118101-118331 bp Feature: gene Location: 1319743-1319991 bp Ori: ASV90028.1 Feature: domain Description: PRK10597 Location: 1319746-1319986 bp Feature: domain Description: PRK1 0597 Location: 1 31 9746-1 31 9986 bp Feature: gene Location: 1320214-1320498 bp Feature: gene Location: 1320576-1322060 bp Ori: ASV90030.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1320978-1321668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 320978-1 321 668 bp Feature: gene Location: 1322060-1322311 bp Feature: gene Location: 1322513-1322722 bp Feature: gene Location: 1399897-1401162 bp Ori: ASV90121.1 Feature: domain Description: umuC Location: 1399900-1401160 bp Feature: domain Description: umuC Location: 1 399900-1 401 1 60 bp Feature: gene Location: 1401164-1401583 bp Ori: ASV90122.1 Feature: domain Description: PRK10276 Location: 1401167-1401578 bp Feature: domain Description: PRK1 0276 Location: 1 401 1 67-1 401 578 bp Feature: gene Location: 1401663-1403147 bp Ori: ASV90123.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1402065-1402755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 402065-1 402755 bp Feature: gene Location: 1403147-1403398 bp Feature: gene Location: 1403725-1404084 bp Ori: ASV93916.1 Feature: domain Description: cupin_WbuC Location: 1403731-1404004 bp Feature: domain Description: cupin_WbuC Location: 1 403731 -1 404004 bp Feature: gene Location: 1573939-1575204 bp Ori: ASV90286.1 Feature: domain Description: umuC Location: 1573942-1575202 bp Feature: domain Description: umuC Location: 1 573942-1 575202 bp Feature: gene Location: 1575207-1575626 bp Ori: ASV90287.1 Feature: domain Description: PRK10276 Location: 1575210-1575621 bp Feature: domain Description: PRK1 0276 Location: 1 57521 0-1 575621 bp Feature: gene Location: 1575705-1577189 bp Ori: ASV90288.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1576107-1576797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5761 07-1 576797 bp Feature: gene Location: 1577189-1577440 bp Feature: gene Location: 1577807-1578049 bp Ori: ASV90290.1 Feature: domain Description: DinI Location: 1577858-1578038 bp Feature: domain Description: DinI Location: 1 577858-1 578038 bp Feature: gene Location: 1646771-1647061 bp Feature: gene Location: 1647073-1647306 bp Ori: ASV90362.1 Feature: domain Description: PRK10597 Location: 1647076-1647301 bp Feature: domain Description: PRK1 0597 Location: 1 647076-1 647301 bp Feature: gene Location: 1647385-1648869 bp Ori: ASV90363.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1647787-1648477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 647787-1 648477 bp Feature: gene Location: 1648869-1649120 bp Feature: gene Location: 1649710-1651071 bp Ori: ASV90365.1 Feature: domain Description: PRK05318 Location: 1649734-1651033 bp Feature: domain Description: PRK0531 8 Location: 1 649734-1 651 033 bp Feature: gene Location: 1809986-1810582 bp Ori: ASV90518.1 Feature: domain Description: TfoX_N Location: 1810034-1810301 bp Feature: domain Description: TfoX_N Location: 1 81 0034-1 81 0301 bp Feature: domain Description: TfoX_C Location: 1810337-1810568 bp Feature: domain Description: TfoX_C Location: 1 81 0337-1 81 0568 bp Feature: gene Location: 1810673-1810891 bp Feature: gene Location: 1810951-1812435 bp Ori: ASV90519.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1811353-1812043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 1 353-1 81 2043 bp Feature: gene Location: 1812435-1812686 bp Feature: gene Location: 1812841-1813350 bp Ori: ASV90521.1 Feature: domain Description: sula Location: 1812847-1813348 bp Feature: domain Description: sula Location: 1 81 2847-1 81 3348 bp Feature: gene Location: 1974982-1975860 bp Ori: ASV93948.1 Feature: domain Description: Phage_CI_repr Location: 1975009-1975192 bp Feature: domain Description: Phage_CI_repr Location: 1 975009-1 9751 92 bp Feature: domain Description: Phage_CI_repr Location: 1975321-1975513 bp Feature: domain Description: Phage_CI_repr Location: 1 975321 -1 97551 3 bp Feature: domain Description: Phage_CI_C Location: 1975540-1975834 bp Feature: domain Description: Phage_CI_C Location: 1 975540-1 975834 bp Feature: gene Location: 1975872-1976816 bp Feature: gene Location: 1976915-1978399 bp Ori: ASV90662.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1977317-1978007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 97731 7-1 978007 bp Feature: gene Location: 1978399-1978650 bp Feature: gene Location: 1978818-1979870 bp Ori: ASV90664.1 Feature: domain Description: int Location: 1978821-1979820 bp Feature: domain Description: int Location: 1 978821 -1 979820 bp Feature: gene Location: 4949776-4952160 bp Ori: ASV93387.1 Feature: domain Description: Phage_GPA Location: 4950340-4951306 bp Feature: domain Description: Phage_GPA Location: 4950340-4951 306 bp Feature: gene Location: 4952390-4952641 bp Feature: gene Location: 4952641-4954125 bp Ori: ASV93389.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4953043-4953733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4953043-4953733 bp Feature: gene Location: 4954233-4954421 bp Feature: gene Location: 4954433-4954666 bp Ori: ASV93390.1 Feature: domain Description: DinI Location: 4954478-4954661 bp Feature: domain Description: DinI Location: 4954478-4954661 bp Feature: gene Location: 5114790-5115128 bp Feature: gene Location: 5115301-5115552 bp Feature: gene Location: 5115552-5117036 bp Ori: ASV93547.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5115954-5116644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 1 5954-51 1 6644 bp Feature: gene Location: 5117113-5117370 bp Feature: gene Location: 5117448-5118032 bp Ori: ASV94075.1 Feature: domain Description: Terminase_2 Location: 5117493-5117958 bp Feature: domain Description: Terminase_2 Location: 51 1 7493-51 1 7958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175), PRK10597 (DNA damage-inducible protein I; Provisional), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), cupin_WbuC (TIGR04366)
DinI (pfam06183), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), TfoX_N (pfam04993), TfoX_C (pfam04994), sula (TIGR00623), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), Phage_GPA (pfam05840), Terminase_2 (pfam03592)