myRT

myRT report for GCA_002278115.2_ASM227811v2

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Seq: CP023144.1 Escherichia coli strain CFSAN061770 plasmid pEGY2, complete sequence (103234 bp)
Overview 1 RT 1: 26435-29582 bp Neighborhood of RT #1 [26435, 29582] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 26435-26543 bp Feature: gene Location: 26581-26766 bp Feature: gene Location: 26744-28411 bp Ori: ASX09142.1 Gene: ltrA Feature: domain Description: RVT_N Location: 26792-27029 bp Feature: domain Description: RVT_N Location: 26792-27029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27080-27722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27080-27722 bp Feature: domain Description: GIIM Note: maturase Location: 27773-28007 bp Feature: domain Description: GIIM Note: maturase Location: 27773-28007 bp Feature: domain Description: HNHc Note: nucleases Location: 28217-28376 bp Feature: domain Description: HNHc Note: nucleases Location: 2821 7-28376 bp Feature: gene Location: 28985-29458 bp Feature: gene Location: 29376-29582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CP023142.1 Escherichia coli strain CFSAN061770 chromosome, complete genome (5292297 bp)
Overview 1 RT 1: 4083632-4086969 bp Neighborhood of RT #1 [4083632, 4086969] YhhI YhhI YhhI RVT-GII GIIM Feature: gene Location: 4083632-4084768 bp Ori: ASX07582.1 Feature: domain Description: YhhI Location: 4083635-4083998 bp Feature: domain Description: YhhI Location: 4083635-4083998 bp Feature: domain Description: YhhI Location: 4084055-4084409 bp Feature: domain Description: YhhI Location: 4084055-4084409 bp Feature: domain Description: YhhI Location: 4084427-4084670 bp Feature: domain Description: YhhI Location: 408442 7-4084670 bp Feature: gene Location: 4084931-4085017 bp Feature: gene Location: 4085215-4086465 bp Ori: ASX07583.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4085419-4086076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4085419-4086076 bp Feature: domain Description: GIIM Note: maturase Location: 4086157-4086379 bp Feature: domain Description: GIIM Note: maturase Location: 4086157-4086379 bp Feature: gene Location: 4086539-4086807 bp Feature: gene Location: 4086829-4086969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)