myRT

myRT report for GCA_002285595.1_ASM228559v1

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Seq: CP023046.1 Mannheimia haemolytica strain 187 chromosome, complete genome (2746467 bp)
Overview 1 RT 1: 172492-181446 bp 2 RT 2: 1346533-1352301 bp Neighborhood of RT #1 [172492, 181481] PRK00566 RVT-UG2 PRK00062 ECA_wecA Neighborhood of RT #2 [1346533, 1352303] YaaA RVT_N RVT-GII rpsI rplM Feature: gene Location: 172492-172683 bp Feature: gene Location: 172755-177038 bp Ori: ASW67707.1 Gene: rpoC Feature: domain Description: PRK00566 Location: 172791-176880 bp Feature: domain Description: PRK00566 Location: 1 72791 -1 76880 bp Feature: gene Location: 177433-178743 bp Ori: ASW67708.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 177628-178447 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 77628-1 78447 bp Feature: gene Location: 178995-180275 bp Ori: ASW67709.1 Gene: hemL Feature: domain Description: PRK00062 Location: 179001-180270 bp Feature: domain Description: PRK00062 Location: 1 79001 -1 80270 bp Feature: gene Location: 180417-181481 bp Ori: ASW67710.1 Feature: domain Description: ECA_wecA Location: 180429-181446 bp Feature: domain Description: ECA_wecA Location: 1 80429-1 81 446 bp Feature: gene Location: 1346533-1347096 bp Feature: gene Location: 1347096-1347872 bp Ori: ASW68778.1 Feature: domain Description: YaaA Location: 1347099-1347867 bp Feature: domain Description: YaaA Location: 1 347099-1 347867 bp Feature: gene Location: 1348061-1349823 bp Gene: ltrA Feature: domain Description: RVT_N Location: 1348172-1348415 bp Feature: domain Description: RVT_N Location: 1 3481 72-1 34841 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1348460-1349120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 348460-1 3491 20 bp Feature: gene Location: 1351463-1351858 bp Ori: ASW68779.1 Feature: domain Description: rpsI Location: 1351475-1351856 bp Feature: domain Description: rpsI Location: 1 351 475-1 351 856 bp Feature: gene Location: 1351875-1352303 bp Ori: ASW68780.1 Feature: domain Description: rplM Location: 1351878-1352301 bp Feature: domain Description: rplM Location: 1 351 878-1 352301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), ECA_wecA (TIGR02380), YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216)