myRT

myRT report for GCA_002285815.1_ASM228581v1

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Seq: CP023043.1 Mannheimia haemolytica strain 193 chromosome, complete genome (2753764 bp)
Overview 1 RT 1: 170515-179469 bp 2 RT 2: 1225102-1230872 bp Neighborhood of RT #1 [170515, 179504] PRK00566 RVT-UG2 PRK00062 ECA_wecA Neighborhood of RT #2 [1225102, 1230872] rplM rpsI RVT_N RVT-GII YaaA Feature: gene Location: 170515-170706 bp Feature: gene Location: 170778-175061 bp Ori: ASW35295.1 Gene: rpoC Feature: domain Description: PRK00566 Location: 170814-174903 bp Feature: domain Description: PRK00566 Location: 1 7081 4-1 74903 bp Feature: gene Location: 175456-176766 bp Ori: ASW35296.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 175651-176470 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 75651 -1 76470 bp Feature: gene Location: 177018-178298 bp Ori: ASW35297.1 Gene: hemL Feature: domain Description: PRK00062 Location: 177024-178293 bp Feature: domain Description: PRK00062 Location: 1 77024-1 78293 bp Feature: gene Location: 178440-179504 bp Ori: ASW35298.1 Feature: domain Description: ECA_wecA Location: 178452-179469 bp Feature: domain Description: ECA_wecA Location: 1 78452-1 79469 bp Feature: gene Location: 1225102-1225530 bp Ori: ASW36301.1 Feature: domain Description: rplM Location: 1225105-1225528 bp Feature: domain Description: rplM Location: 1 2251 05-1 225528 bp Feature: gene Location: 1225547-1225942 bp Ori: ASW36302.1 Feature: domain Description: rpsI Location: 1225559-1225940 bp Feature: domain Description: rpsI Location: 1 225559-1 225940 bp Feature: gene Location: 1227582-1229344 bp Gene: ltrA Feature: domain Description: RVT_N Location: 1227693-1227936 bp Feature: domain Description: RVT_N Location: 1 227693-1 227936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1227981-1228641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 227981 -1 228641 bp Feature: gene Location: 1229533-1230309 bp Ori: ASW36303.1 Feature: domain Description: YaaA Location: 1229536-1230304 bp Feature: domain Description: YaaA Location: 1 229536-1 230304 bp Feature: gene Location: 1230309-1230872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), ECA_wecA (TIGR02380), rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022)