myRT

myRT report for GCA_002285935.1_ASM228593v1

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Seq: CP023141.1 Aeromonas dhakensis strain KN-Mc-6U21 chromosome, complete genome (4868053 bp)
Overview 1 RT 1: 2515004-2520980 bp 2 RT 2: 2928343-2935601 bp 3 RT 3: 4259305-4265896 bp Neighborhood of RT #1 [2515004, 2520991] RVT-UG7 GAF_3 GGDEF Neighborhood of RT #2 [2928343, 2935660] guaA Arm-DNA-bind_3 INT_P4_C RVT-Retrons Phage_AlpA Neighborhood of RT #3 [4259305, 4265896] AraC RVT-Retrons TIR_2 PRK01254 Feature: gene Location: 2515004-2515618 bp Feature: gene Location: 2515822-2516583 bp Feature: gene Location: 2516558-2518204 bp Ori: ASX11463.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2517002-2517389 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 251 7002-251 7389 bp Feature: gene Location: 2519726-2519932 bp Feature: gene Location: 2519978-2520991 bp Ori: ASX11465.1 Feature: domain Description: GAF_3 Location: 2520047-2520443 bp Feature: domain Description: GAF_3 Location: 2520047-2520443 bp Feature: domain Description: GGDEF Location: 2520446-2520980 bp Feature: domain Description: GGDEF Location: 2520446-2520980 bp Feature: gene Location: 2928343-2929932 bp Ori: ASX11775.1 Feature: domain Description: guaA Location: 2928361-2929930 bp Feature: domain Description: guaA Location: 2928361 -2929930 bp Feature: gene Location: 2930241-2931428 bp Ori: ASX11776.1 Feature: domain Description: Arm-DNA-bind_3 Location: 2930247-2930505 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2930247-2930505 bp Feature: domain Description: INT_P4_C Location: 2930856-2931411 bp Feature: domain Description: INT_P4_C Location: 2930856-2931 41 1 bp Feature: gene Location: 2931686-2932753 bp Ori: ASX11777.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2931830-2932478 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2931 830-2932478 bp Feature: gene Location: 2934336-2935352 bp Feature: gene Location: 2935430-2935660 bp Ori: ASX11779.1 Feature: domain Description: Phage_AlpA Location: 2935457-2935601 bp Feature: domain Description: Phage_AlpA Location: 2935457-2935601 bp Feature: gene Location: 4259305-4260345 bp Ori: ASX12842.1 Feature: domain Description: AraC Location: 4260013-4260322 bp Feature: domain Description: AraC Location: 426001 3-4260322 bp Feature: gene Location: 4260347-4260574 bp Feature: gene Location: 4261278-4262756 bp Ori: ASX12843.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4261530-4262142 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4261 530-42621 42 bp Feature: domain Description: TIR_2 Location: 4262478-4262754 bp Feature: domain Description: TIR_2 Location: 4262478-4262754 bp Feature: gene Location: 4262965-4265388 bp Ori: ASX12844.1 Feature: domain Description: PRK01254 Location: 4262968-4265068 bp Feature: domain Description: PRK01 254 Location: 4262968-4265068 bp Feature: gene Location: 4265525-4265896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, GAF_3 (pfam13492), GGDEF (TIGR00254), guaA (PRK00074), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons, Phage_AlpA (pfam05930), AraC (COG2207), TIR_2 (pfam13676)
PRK01254 (YgiQ family radical SAM protein)