myRT

myRT report for GCA_002302335.1_ASM230233v1

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Seq: CP023350.1 Escherichia coli strain ETEC-2264 plasmid unnamed1, complete sequence (112045 bp)
Overview 1 RT 1: 2883-6501 bp 2 RT 2: 21698-24808 bp Neighborhood of RT #1 [2883, 6501] DUF1281 DUF1281_C RVT_N RVT-GII YkfC HNHc Neighborhood of RT #2 [21698, 24808] DDE_Tnp_IS66_C RVT-GII GIIM Feature: gene Location: 2883-3785 bp Ori: ATB16749.1 Feature: domain Description: DUF1281 Location: 2952-3480 bp Feature: domain Description: DUF1 281 Location: 2952-3480 bp Feature: domain Description: DUF1281_C Location: 3486-3726 bp Feature: domain Description: DUF1 281 _C Location: 3486-3726 bp Feature: gene Location: 3785-3856 bp Feature: gene Location: 3862-5586 bp Ori: ATB16750.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3919-4156 bp Feature: domain Description: RVT_N Location: 391 9-41 56 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4207-4855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4207-4855 bp Feature: domain Description: YkfC Location: 4987-5143 bp Feature: domain Description: YkfC Location: 4987-51 43 bp Feature: domain Description: HNHc Note: nucleases Location: 5371-5530 bp Feature: domain Description: HNHc Note: nucleases Location: 5371 -5530 bp Feature: gene Location: 5849-6148 bp Feature: gene Location: 6232-6501 bp Feature: gene Location: 21698-21901 bp Feature: gene Location: 22325-22504 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 22370-22481 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 22370-22481 bp Feature: gene Location: 22572-23765 bp Ori: ATB16775.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22722-23373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22722-23373 bp Feature: domain Description: GIIM Note: maturase Location: 23451-23676 bp Feature: domain Description: GIIM Note: maturase Location: 23451 -23676 bp Feature: gene Location: 23776-24195 bp Feature: gene Location: 24511-24808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), DUF1281_C (pfam18406), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DDE_Tnp_IS66_C (pfam13817), GIIM (pfam08388)