myRT

myRT report for GCA_002305895.1_ASM230589v1

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Seq: CP022203.1 Myxococcus macrosporus DSM 14697 chromosome, complete genome (8973512 bp)
Overview 1 RT 1: 175640-188340 bp 2 RT 2: 1691701-1697275 bp 3 RT 3: 2279175-2285196 bp 4 RT 4: 2384340-2388622 bp 5 RT 5: 5962815-5968911 bp 6 RT 6: 6915530-6922054 bp 7 RT 7: 7350397-7354341 bp 8 RT 8: 7482702-7489860 bp Neighborhood of RT #1 [175640, 188429] BetA BetA BetA DAP2 RVT-Retrons WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Neighborhood of RT #2 [1691701, 1697661] M3B_PepF RVT-GII GIIM RluA GT2_AmsE_like Neighborhood of RT #3 [2279175, 2285196] RVT-GII GIIM HTH_50 HTH_50 Neighborhood of RT #4 [2384340, 2389107] OMP_b-brl RVT-GII GIIM CIMS_like FRG Neighborhood of RT #5 [5962815, 5969243] CBM_4_9 Glyco_hydro_6 GatA RVT-GII GIIM Lys9 Neighborhood of RT #6 [6915530, 6922062] COG1579 RNase_HI_like RVT-Retrons COG4941 TIGR02267 Neighborhood of RT #7 [7350397, 7354466] DUF790 HTH_XRE RVT-GII GIIM AtoC Neighborhood of RT #8 [7482702, 7489865] RVT-Retrons EpmB EpmB DUF962 Feature: gene Location: 175640-177136 bp Ori: ATB44581.1 Feature: domain Description: BetA Location: 175643-176123 bp Feature: domain Description: BetA Location: 1 75643-1 761 23 bp Feature: domain Description: BetA Location: 176240-176537 bp Feature: domain Description: BetA Location: 1 76240-1 76537 bp Feature: domain Description: BetA Location: 176702-177113 bp Feature: domain Description: BetA Location: 1 76702-1 771 1 3 bp Feature: gene Location: 177315-178181 bp Ori: ATB44582.1 Feature: domain Description: DAP2 Location: 177444-178032 bp Feature: domain Description: DAP2 Location: 1 77444-1 78032 bp Feature: gene Location: 178185-179642 bp Ori: ATB44583.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 178743-179385 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 78743-1 79385 bp Feature: gene Location: 180043-181896 bp Feature: gene Location: 181893-188429 bp Ori: ATB44585.1 Feature: domain Description: WD40 Location: 182052-182748 bp Feature: domain Description: WD40 Location: 1 82052-1 82748 bp Feature: domain Description: HEAT_2 Location: 182922-183132 bp Feature: domain Description: HEAT_2 Location: 1 82922-1 831 32 bp Feature: domain Description: HEAT_2 Location: 183735-183984 bp Feature: domain Description: HEAT_2 Location: 1 83735-1 83984 bp Feature: domain Description: HEAT_2 Location: 184224-184455 bp Feature: domain Description: HEAT_2 Location: 1 84224-1 84455 bp Feature: domain Description: HEAT_2 Location: 184839-185046 bp Feature: domain Description: HEAT_2 Location: 1 84839-1 85046 bp Feature: domain Description: HEAT_2 Location: 185181-185316 bp Feature: domain Description: HEAT_2 Location: 1 851 81 -1 8531 6 bp Feature: domain Description: HEAT_2 Location: 185676-185865 bp Feature: domain Description: HEAT_2 Location: 1 85676-1 85865 bp Feature: domain Description: HEAT_2 Location: 185910-186114 bp Feature: domain Description: HEAT_2 Location: 1 8591 0-1 861 1 4 bp Feature: domain Description: HEAT_2 Location: 186282-186516 bp Feature: domain Description: HEAT_2 Location: 1 86282-1 8651 6 bp Feature: domain Description: HEAT_2 Location: 187122-187344 bp Feature: domain Description: HEAT_2 Location: 1 871 22-1 87344 bp Feature: domain Description: HEAT_2 Location: 187839-188070 bp Feature: domain Description: HEAT_2 Location: 1 87839-1 88070 bp Feature: domain Description: HEAT_2 Location: 188199-188340 bp Feature: domain Description: HEAT_2 Location: 1 881 99-1 88340 bp Feature: gene Location: 1691701-1692048 bp Feature: gene Location: 1692067-1693587 bp Ori: ATB45836.1 Feature: domain Description: M3B_PepF Location: 1692868-1693039 bp Feature: domain Description: M3B_PepF Location: 1 692868-1 693039 bp Feature: gene Location: 1694185-1695618 bp Ori: ATB45837.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1694503-1695136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 694503-1 6951 36 bp Feature: domain Description: GIIM Note: maturase Location: 1695226-1695445 bp Feature: domain Description: GIIM Note: maturase Location: 1 695226-1 695445 bp Feature: gene Location: 1695747-1696691 bp Ori: ATB45838.1 Feature: domain Description: RluA Location: 1695822-1696611 bp Feature: domain Description: RluA Location: 1 695822-1 69661 1 bp Feature: gene Location: 1696696-1697661 bp Ori: ATB45839.1 Feature: domain Description: GT2_AmsE_like Location: 1696705-1697275 bp Feature: domain Description: GT2_AmsE_like Location: 1 696705-1 697275 bp Feature: gene Location: 2279175-2279894 bp Feature: gene Location: 2279867-2280493 bp Feature: gene Location: 2281191-2282624 bp Ori: ATB46343.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2281509-2282142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2281 509-22821 42 bp Feature: domain Description: GIIM Note: maturase Location: 2282232-2282451 bp Feature: domain Description: GIIM Note: maturase Location: 2282232-2282451 bp Feature: gene Location: 2283224-2284378 bp Ori: ATB46344.1 Feature: domain Description: HTH_50 Location: 2283359-2283422 bp Feature: domain Description: HTH_50 Location: 2283359-2283422 bp Feature: domain Description: HTH_50 Location: 2283845-2283911 bp Feature: domain Description: HTH_50 Location: 2283845-228391 1 bp Feature: gene Location: 2284387-2285196 bp Feature: gene Location: 2384340-2384936 bp Ori: ATB46428.1 Feature: domain Description: OMP_b-brl Location: 2384385-2384868 bp Feature: domain Description: OMP_b-brl Location: 2384385-2384868 bp Feature: gene Location: 2384933-2385769 bp Feature: gene Location: 2385805-2387040 bp Ori: ATB46430.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2385925-2386558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2385925-2386558 bp Feature: domain Description: GIIM Note: maturase Location: 2386648-2386867 bp Feature: domain Description: GIIM Note: maturase Location: 2386648-2386867 bp Feature: gene Location: 2387065-2388156 bp Ori: ATB46431.1 Feature: domain Description: CIMS_like Location: 2387455-2388097 bp Feature: domain Description: CIMS_like Location: 2387455-2388097 bp Feature: gene Location: 2388268-2389107 bp Ori: ATB46432.1 Feature: domain Description: FRG Location: 2388361-2388622 bp Feature: domain Description: FRG Location: 2388361 -2388622 bp Feature: gene Location: 5962815-5964230 bp Ori: ATB49094.1 Feature: domain Description: CBM_4_9 Location: 5962914-5963280 bp Feature: domain Description: CBM_4_9 Location: 596291 4-5963280 bp Feature: domain Description: Glyco_hydro_6 Location: 5963424-5964171 bp Feature: domain Description: Glyco_hydro_6 Location: 5963424-59641 71 bp Feature: gene Location: 5964420-5966093 bp Ori: ATB49095.1 Feature: domain Description: GatA Location: 5964693-5966064 bp Feature: domain Description: GatA Location: 5964693-5966064 bp Feature: gene Location: 5966118-5967353 bp Ori: ATB49096.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5966238-5966871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5966238-5966871 bp Feature: domain Description: GIIM Note: maturase Location: 5966961-5967180 bp Feature: domain Description: GIIM Note: maturase Location: 5966961 -59671 80 bp Feature: gene Location: 5967389-5968273 bp Feature: gene Location: 5968146-5969243 bp Ori: ATB49098.1 Feature: domain Description: Lys9 Location: 5968167-5968911 bp Feature: domain Description: Lys9 Location: 59681 67-596891 1 bp Feature: gene Location: 6915530-6916369 bp Ori: ATB49865.1 Feature: domain Description: COG1579 Location: 6915647-6916340 bp Feature: domain Description: COG1 579 Location: 691 5647-691 6340 bp Feature: gene Location: 6916388-6917026 bp Ori: ATB49866.1 Feature: domain Description: RNase_HI_like Location: 6916637-6917015 bp Feature: domain Description: RNase_HI_like Location: 691 6637-691 701 5 bp Feature: gene Location: 6918306-6919496 bp Ori: ATB49867.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6918609-6919263 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 691 8609-691 9263 bp Feature: gene Location: 6920006-6921202 bp Ori: ATB49868.1 Feature: domain Description: COG4941 Location: 6920012-6921188 bp Feature: domain Description: COG4941 Location: 692001 2-6921 1 88 bp Feature: gene Location: 6921682-6922062 bp Ori: ATB49869.1 Feature: domain Description: TIGR02267 Location: 6921685-6922054 bp Feature: domain Description: TIGR02267 Location: 6921 685-6922054 bp Feature: gene Location: 7350397-7351608 bp Ori: ATB50231.1 Feature: domain Description: DUF790 Location: 7350400-7351570 bp Feature: domain Description: DUF790 Location: 7350400-7351 570 bp Feature: gene Location: 7351618-7351905 bp Ori: ATB50232.1 Feature: domain Description: HTH_XRE Location: 7351621-7351738 bp Feature: domain Description: HTH_XRE Location: 7351 621 -7351 738 bp Feature: gene Location: 7352008-7353243 bp Ori: ATB50233.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7352128-7352761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73521 28-7352761 bp Feature: domain Description: GIIM Note: maturase Location: 7352851-7353070 bp Feature: domain Description: GIIM Note: maturase Location: 7352851 -7353070 bp Feature: gene Location: 7353279-7354010 bp Feature: gene Location: 7354113-7354466 bp Ori: ATB50235.1 Feature: domain Description: AtoC Location: 7354125-7354341 bp Feature: domain Description: AtoC Location: 73541 25-7354341 bp Feature: gene Location: 7482702-7484621 bp Feature: gene Location: 7484618-7486222 bp Feature: gene Location: 7486388-7487671 bp Ori: ATB50342.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7486853-7487456 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7486853-7487456 bp Feature: gene Location: 7487991-7489325 bp Ori: ATB50343.1 Feature: domain Description: EpmB Location: 7488060-7488234 bp Feature: domain Description: EpmB Location: 7488060-7488234 bp Feature: domain Description: EpmB Location: 7488384-7489140 bp Feature: domain Description: EpmB Location: 7488384-74891 40 bp Feature: gene Location: 7489437-7489865 bp Ori: ATB50344.1 Feature: domain Description: DUF962 Location: 7489581-7489860 bp Feature: domain Description: DUF962 Location: 7489581 -7489860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BetA (COG2303), DAP2 (COG1506), RVT-Retrons, WD40 (smart00320), HEAT_2 (pfam13646), M3B_PepF (cd09610), RVT-GII, GIIM (pfam08388), RluA (COG0564), GT2_AmsE_like (cd04195)
HTH_50 (pfam18024), OMP_b-brl (pfam13505), CIMS_like (cd03310), FRG (smart00901), CBM_4_9 (pfam02018), Glyco_hydro_6 (pfam01341), GatA (COG0154), Lys9 (COG1748), COG1579 (Predicted nucleic acid-binding protein, contains Zn-ribbon domain ), RNase_HI_like (cd09279)
COG4941 (Predicted RNA polymerase sigma factor, contains C-terminal TPR domain ), TIGR02267 (DUSAM domain), DUF790 (pfam05626), HTH_XRE (smart00530), AtoC (COG2204), EpmB (COG1509), DUF962 (pfam06127)