myRT

myRT report for GCA_002310575.1_ASM231057v1

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Seq: CP023357.1 Escherichia coli strain 317 chromosome, complete genome (5035905 bp)
Overview 1 RT 1: 1384952-1392027 bp Neighborhood of RT #1 [1384952, 1392027] RVT-AbiP2 HTH_29 HTH_33 DDE_3 Feature: gene Location: 1384952-1388803 bp Feature: gene Location: 1389017-1389226 bp Feature: gene Location: 1389185-1390564 bp Ori: ATB80642.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1389455-1389911 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 389455-1 38991 1 bp Feature: gene Location: 1390666-1391703 bp Ori: ATB77279.1 Feature: domain Description: HTH_29 Location: 1390762-1390933 bp Feature: domain Description: HTH_29 Location: 1 390762-1 390933 bp Feature: domain Description: HTH_33 Location: 1390966-1391128 bp Feature: domain Description: HTH_33 Location: 1 390966-1 391 1 28 bp Feature: domain Description: DDE_3 Location: 1391170-1391599 bp Feature: domain Description: DDE_3 Location: 1 391 1 70-1 391 599 bp Feature: gene Location: 1391737-1392027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358)

Seq: CP023358.1 Escherichia coli strain 317 plasmid p100, complete sequence (100008 bp)
Overview 1 RT 1: 59746-63480 bp Neighborhood of RT #1 [59746, 63506] PinE RVT-GII RVT-GII GIIM CPBP Feature: gene Location: 59746-60018 bp Feature: gene Location: 60011-60550 bp Ori: ATB80864.1 Feature: domain Description: PinE Location: 60224-60542 bp Feature: domain Description: PinE Location: 602 2 4-60542 bp Feature: gene Location: 60913-61239 bp Ori: ATB80898.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61081-61162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61081-61162 bp Feature: gene Location: 61239-62045 bp Ori: ATB80865.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61242-61605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 612 42 -61605 bp Feature: domain Description: GIIM Note: maturase Location: 61653-61884 bp Feature: domain Description: GIIM Note: maturase Location: 61653-61884 bp Feature: gene Location: 62666-62866 bp Feature: gene Location: 62871-63506 bp Ori: ATB80867.1 Feature: domain Description: CPBP Location: 63204-63480 bp Feature: domain Description: CPBP Location: 632 04-63480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), CPBP