myRT

myRT report for GCA_002310655.1_ASM231065v1

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Seq: CP023353.1 Escherichia coli strain 746 chromosome, complete genome (5089615 bp)
Overview 1 RT 1: 2048033-2050646 bp 2 RT 2: 3954803-3961183 bp Neighborhood of RT #1 [2048033, 2050646] Asparaginase_2 RVT-GII RVT-GII Neighborhood of RT #2 [3954803, 3961183] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Feature: gene Location: 2048033-2049064 bp Ori: ATB72824.1 Feature: domain Description: Asparaginase_2 Location: 2048123-2049056 bp Feature: domain Description: Asparaginase_2 Location: 20481 23-2049056 bp Feature: gene Location: 2049222-2049424 bp Feature: gene Location: 2049472-2049636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2049484-2049631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2049484-2049631 bp Feature: gene Location: 2049588-2050034 bp Ori: ATB72825.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2049894-2049996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2049894-2049996 bp Feature: gene Location: 2050259-2050468 bp Feature: gene Location: 2050518-2050646 bp Feature: gene Location: 3954803-3955723 bp Ori: ATB74566.1 Feature: domain Description: AbiEii Location: 3954845-3955586 bp Feature: domain Description: AbiEii Location: 3954845-3955586 bp Feature: gene Location: 3955710-3956513 bp Ori: ATB74567.1 Feature: domain Description: AbiEi_3_N Location: 3955743-3956004 bp Feature: domain Description: AbiEi_3_N Location: 3955743-3956004 bp Feature: domain Description: AbiEi_3 Location: 3956016-3956472 bp Feature: domain Description: AbiEi_3 Location: 395601 6-3956472 bp Feature: gene Location: 3956808-3960017 bp Ori: ATB74568.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3957336-3957825 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3957336-3957825 bp Feature: domain Description: nitrilase Location: 3959331-3959928 bp Feature: domain Description: nitrilase Location: 3959331 -3959928 bp Feature: gene Location: 3960364-3960834 bp Feature: gene Location: 3961025-3961183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424)

Seq: CP023354.1 Escherichia coli strain 746 plasmid p62, complete sequence (62312 bp)
Overview 1 RT 1: 6901-10370 bp Neighborhood of RT #1 [6901, 10429] RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 6901-7083 bp Feature: gene Location: 7167-7463 bp Feature: gene Location: 7726-9450 bp Ori: ATB75789.1 Gene: ltrA Feature: domain Description: RVT_N Location: 7783-8020 bp Feature: domain Description: RVT_N Location: 7783-802 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8071-8719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8071-8719 bp Feature: domain Description: YkfC Location: 8851-9007 bp Feature: domain Description: YkfC Location: 8851-9007 bp Feature: domain Description: HNHc Note: nucleases Location: 9235-9394 bp Feature: domain Description: HNHc Note: nucleases Location: 92 35-9394 bp Feature: gene Location: 9456-9527 bp Feature: gene Location: 9527-10429 bp Ori: ATB75790.1 Feature: domain Description: DUF1281 Location: 9596-10124 bp Feature: domain Description: DUF12 81 Location: 9596-1012 4 bp Feature: domain Description: DUF1281_C Location: 10130-10370 bp Feature: domain Description: DUF12 81_C Location: 10130-10370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)