myRT

myRT report for GCA_002355415.1_ASM235541v1

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Seq: AP014936.1 Sulfurifustis variabilis DNA, complete genome, strain: skN76 (3958814 bp)
Overview 1 RT 1: 383277-390133 bp 2 RT 2: 3283966-3288542 bp 3 RT 3: 3731529-3737810 bp Neighborhood of RT #1 [383277, 390150] PRK10218 RVT_N RVT-GII GIIM HNHc HslO SixA Neighborhood of RT #2 [3283966, 3288622] COG3350 Rieske_proteo RVT-GII GIIM cztS_silS_copS Neighborhood of RT #3 [3731529, 3737827] PRK11840 PRK05659 RVT_N RVT-GII GIIM HNHc AsmA AsmA SRPBCC_11 Feature: gene Location: 383277-383792 bp Feature: gene Location: 383860-385677 bp Ori: BAU46970.1 Feature: domain Description: PRK10218 Location: 383866-385669 bp Feature: domain Description: PRK1 021 8 Location: 383866-385669 bp Feature: gene Location: 386111-387796 bp Ori: BAU46971.1 Feature: domain Description: RVT_N Location: 386159-386405 bp Feature: domain Description: RVT_N Location: 3861 59-386405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386447-387149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386447-3871 49 bp Feature: domain Description: GIIM Note: maturase Location: 387221-387452 bp Feature: domain Description: GIIM Note: maturase Location: 387221 -387452 bp Feature: domain Description: HNHc Note: nucleases Location: 387626-387767 bp Feature: domain Description: HNHc Note: nucleases Location: 387626-387767 bp Feature: gene Location: 388671-389552 bp Ori: BAU46972.1 Feature: domain Description: HslO Location: 388689-389502 bp Feature: domain Description: HslO Location: 388689-389502 bp Feature: gene Location: 389644-390150 bp Ori: BAU46973.1 Feature: domain Description: SixA Location: 389647-390133 bp Feature: domain Description: SixA Location: 389647-3901 33 bp Feature: gene Location: 3283966-3284163 bp Ori: BAU49782.1 Feature: domain Description: COG3350 Location: 3283969-3284104 bp Feature: domain Description: COG3350 Location: 3283969-32841 04 bp Feature: gene Location: 3284220-3284816 bp Ori: BAU49783.1 Feature: domain Description: Rieske_proteo Location: 3284238-3284781 bp Feature: domain Description: Rieske_proteo Location: 3284238-3284781 bp Feature: gene Location: 3285058-3286443 bp Ori: BAU49784.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3285403-3286018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3285403-328601 8 bp Feature: domain Description: GIIM Note: maturase Location: 3286078-3286291 bp Feature: domain Description: GIIM Note: maturase Location: 3286078-3286291 bp Feature: gene Location: 3286873-3287058 bp Feature: gene Location: 3287153-3288622 bp Ori: BAU49786.1 Feature: domain Description: cztS_silS_copS Location: 3287165-3288542 bp Feature: domain Description: cztS_silS_copS Location: 32871 65-3288542 bp Feature: gene Location: 3731529-3732344 bp Ori: BAU50228.1 Feature: domain Description: PRK11840 Location: 3731565-3732336 bp Feature: domain Description: PRK1 1 840 Location: 3731 565-3732336 bp Feature: gene Location: 3732344-3732544 bp Ori: BAU50229.1 Feature: domain Description: PRK05659 Location: 3732347-3732542 bp Feature: domain Description: PRK05659 Location: 3732347-3732542 bp Feature: gene Location: 3733527-3735170 bp Ori: BAU50230.1 Feature: domain Description: RVT_N Location: 3733578-3733821 bp Feature: domain Description: RVT_N Location: 3733578-3733821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3733866-3734490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3733866-3734490 bp Feature: domain Description: GIIM Note: maturase Location: 3734544-3734775 bp Feature: domain Description: GIIM Note: maturase Location: 3734544-3734775 bp Feature: domain Description: HNHc Note: nucleases Location: 3734976-3735132 bp Feature: domain Description: HNHc Note: nucleases Location: 3734976-37351 32 bp Feature: gene Location: 3735324-3737276 bp Ori: BAU50231.1 Feature: domain Description: AsmA Location: 3735333-3735960 bp Feature: domain Description: AsmA Location: 3735333-3735960 bp Feature: domain Description: AsmA Location: 3736209-3736989 bp Feature: domain Description: AsmA Location: 3736209-3736989 bp Feature: gene Location: 3737273-3737827 bp Ori: BAU50232.1 Feature: domain Description: SRPBCC_11 Location: 3737402-3737810 bp Feature: domain Description: SRPBCC_1 1 Location: 3737402-373781 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10218 (translational GTPase TypA), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), HslO (COG1281), SixA (COG2062), COG3350 (Uncharacterized conserved protein, YHS domain ), Rieske_proteo (TIGR01416), cztS_silS_copS (TIGR01386)
PRK11840 (bifunctional sulfur carrier protein/thiazole synthase protein; Provisional), PRK05659 (sulfur carrier protein ThiS; Validated), AsmA (pfam05170), SRPBCC_11 (cd08866)