myRT report for GCA_002356235.1_ASM235623v1
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Seq: AP018045.1 Photobacterium damselae subsp. piscicida DNA, chromosome: 1, complete genome (3172118 bp)
Associated domains:myRT
| PRK00299 (sulfurtransferase TusA) | , RVT-GII | , GIIM (pfam08388) | , Gdt1 (COG2119) | , srlR (PRK10434) | , PRK00331 (isomerizing glutamine--fructose-6-phosphate transaminase) | , Zn_Tnp_IS91 (pfam14319) | , Y2_Tnp (pfam04986) | , Ggt (COG0405) | , PRK11057 (ATP-dependent DNA helicase RecQ; Provisional) |
PRK11212 (7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter), InsA (COG3677) | , PRK10930 (FtsH protease activity modulator HflK) | , hflC (TIGR01932) | , yjeT (COG3242) | , TamA (COG0729) | , TamB (pfam04357) | , RHOD (smart00450) | , PRK01250 (inorganic diphosphatase) | , RpsU (COG0828) |
PRK09604 (tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD), PRK00220 (glycerol-3-phosphate 1-O-acyltransferase PlsY) | , folB (TIGR00525) | , YkaA (COG1392) | , PPPi (COG3025) | , KOG3713 (KOG3713, Voltage-gated K+ channel KCNB/KCNC ) | , PRK11072 (bifunctional adenylyltransferase) | , parC_Gneg (TIGR01062) | , PRK15018 (1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional) | , IPP_Isomerase (cd02885) |
PRK11401 (enamine/imine deaminase), PRK02406 (DNA polymerase IV; Validated) | , PRK15026 (aminoacyl-histidine dipeptidase; Provisional) | , AzgA (COG2252) | , PRK09177 (xanthine-guanine phosphoribosyltransferase; Validated) | , PRK04946 (endonuclease SmrB) | , PRK11805 (50S ribosomal protein L3 N(5)-glutamine methyltransferase) | , PRK11106 (queuosine biosynthesis protein QueC; Provisional) | , CysK (COG0031) | , PRK08974 (long-chain-fatty-acid--CoA ligase FadD) |
PRK10829 (ribonuclease D; Provisional), minE (TIGR01215) | , PRK10818 (septum site-determining protein MinD) | , COG4890 (Predicted outer membrane lipoprotein ) | , Cyd_oper_YbgE (pfam09600) | , thio_ybgC (TIGR02799) | , PRK10801 (Tol-Pal system protein TolQ) | , DUF2498 (pfam10692) | , PRK07561 (DNA topoisomerase I subunit omega; Validated) | , MiaE (pfam06175) |
PRK05560 (DNA gyrase subunit A; Validated), PRK05355 (3-phosphoserine/phosphohydroxythreonine transaminase) | , YddA (COG4178) | , grxA (PRK11200) | , Fe-ADH-like (cd17814) | , PRK10659 (acetate uptake transporter) | , LolD_lipo_ex (TIGR02211) | , PRK11146 (lipoprotein-releasing ABC transporter permease subunit LolE) | , kdsB (TIGR00466) | , RaiA (COG1544) |
TcyP (COG1823), PRK10494 (envelope biogenesis factor ElyC) | , PRK03784 (vtamin B12-transporter permease; Provisional) | , PRK03695 (vitamin B12-transporter ATPase; Provisional) | , YccC (COG1289) | , PRK03818 (putative transporter; Validated) | , potA (TIGR01187) | , COG5473 (Uncharacterized membrane protein ) | , DUF2987 (pfam11205) | , PRK05469 (tripeptide aminopeptidase PepT) |
PqiA (pfam04403), PqiB (COG3008) | , PRK10807 (intermembrane transport protein PqiB) | , PHA02517 (putative transposase OrfB; Reviewed) | , InsE (COG2963) | , HypB (COG0378) | , COG3671 (Uncharacterized membrane protein ) | , heme_HutZ (TIGR04110) | , acyl_WS_DGAT (TIGR02946) | , PRK11598 (putative metal dependent hydrolase; Provisional) |
YCCS_YHJK (TIGR01667), torC (TIGR02162) | , NapE (pfam06796) | , RplT (COG0292) | , rpmI (PRK00172) | , dCache_1 (pfam02743) | , Tar (COG0840) | , GGDEF (TIGR00254) | , YuiF (COG2056) | , ROF (pfam07073) |
PRK10824 (Grx4 family monothiol glutaredoxin), PRK10543 (superoxide dismutase ) | , yeaC (COG3139) | , DUF2989 (pfam11207) | , PRK00222 (peptide-methionine (R)-S-oxide reductase MsrB) | , gapA (PRK15425) | , PRK13506 (formate--tetrahydrofolate ligase; Provisional) | , pflA (PRK11145) | , PrtC (COG0826) | , PRK04964 (hypothetical protein; Provisional) |
DUF4250 (pfam14056), araaP (TIGR00837) | , ddl (PRK01966) | , PRK10880 (adenine DNA glycosylase) | , YggX (COG2924) | , HC2 (pfam07382) | , PBP_1b (TIGR02071) | , PRK11664 (ATP-dependent RNA helicase HrpB; Provisional) | , PRK06467 (dihydrolipoamide dehydrogenase; Reviewed) | , aceF (PRK11854) |
PRK00418 (DNA gyrase inhibitor YacG), PRK10776 (8-oxo-dGTP diphosphatase MutT) | , PRK13107 (preprotein translocase subunit SecA; Reviewed) | , COG4701 (Uncharacterized protein ) | , PRK10942 (serine endoprotease DegP) | , protease_degS (TIGR02038) | , MurA (COG0766) | , IbaG (COG5007) | , PRK11712 (ribonuclease G; Provisional) | , PRK00032 (septum formation inhibitor Maf) |
PRK11060 (rod shape-determining protein MreD; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional) | , PRK11041 (DNA-binding transcriptional regulator CytR; Provisional) | , FtsN (COG3087) | , HslV (COG5405) | , hslU (TIGR00390) | , rpmG (PRK00595) | , RpmB (COG0227) | , ComFC (COG1040) | , PRK11190 (iron-sulfur cluster biogenesis protein NfuA) |
3D_containing_proteins (cd14667), MATE_DinF_like (cd13136) | , DUF2500 (pfam10694) | , Acyl_transf_3 (pfam01757) | , YdfG (COG4221) | , ABG_transport (pfam03806) |
