myRT

myRT report for GCA_002356555.2_HH1059_assembly_1.0

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Seq: AP017372.2 Halorhodospira halochloris DNA, nearly complete genome, strain: DSM 1059 (2834560 bp)
Overview 1 RT 1: 1174432-1181001 bp 2 RT 2: 1186155-1189398 bp 3 RT 3: 1195502-1198031 bp Neighborhood of RT #1 [1174432, 1181276] Abi_C DUF3800 RVT-GII Mrr AAA_21 Neighborhood of RT #2 [1186155, 1189472] PLDc_Bfil_DEXD_like RVT-GII RVT-GII HigB antidote_HigA Neighborhood of RT #3 [1195502, 1198045] BrnT_toxin BrnA_antitoxin RVT-GII HicB Y1_Tnp Feature: gene Location: 1174432-1175178 bp Ori: BBE11029.1 Feature: domain Description: Abi_C Location: 1174948-1175137 bp Feature: domain Description: Abi_C Location: 1 1 74948-1 1 751 37 bp Feature: gene Location: 1175376-1176422 bp Ori: BAU57790.1 Feature: domain Description: DUF3800 Location: 1175394-1176231 bp Feature: domain Description: DUF3800 Location: 1 1 75394-1 1 76231 bp Feature: gene Location: 1177067-1178392 bp Ori: BAU57791.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1177352-1178018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 77352-1 1 7801 8 bp Feature: gene Location: 1178525-1179442 bp Ori: BAU57792.1 Feature: domain Description: Mrr Location: 1178531-1179437 bp Feature: domain Description: Mrr Location: 1 1 78531 -1 1 79437 bp Feature: gene Location: 1179690-1181276 bp Ori: BAU57794.1 Feature: domain Description: AAA_21 Location: 1180317-1181001 bp Feature: domain Description: AAA_21 Location: 1 1 8031 7-1 1 81 001 bp Feature: gene Location: 1186155-1186583 bp Ori: BBE11035.1 Feature: domain Description: PLDc_Bfil_DEXD_like Location: 1186182-1186515 bp Feature: domain Description: PLDc_Bfil_DEXD_like Location: 1 1 861 82-1 1 8651 5 bp Feature: gene Location: 1186587-1187339 bp Feature: gene Location: 1187731-1188144 bp Ori: BBE11037.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1187881-1188052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 87881 -1 1 88052 bp Feature: gene Location: 1188095-1188559 bp Ori: BAU57802.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1188125-1188311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 881 25-1 1 8831 1 bp Feature: gene Location: 1188869-1189147 bp Ori: BBE11038.1 Feature: domain Description: HigB Location: 1188872-1189145 bp Feature: domain Description: HigB Location: 1 1 88872-1 1 891 45 bp Feature: gene Location: 1189158-1189472 bp Ori: BAU57804.1 Feature: domain Description: antidote_HigA Location: 1189176-1189398 bp Feature: domain Description: antidote_HigA Location: 1 1 891 76-1 1 89398 bp Feature: gene Location: 1195502-1195870 bp Ori: BBE11044.1 Feature: domain Description: BrnT_toxin Location: 1195619-1195850 bp Feature: domain Description: BrnT_toxin Location: 1 1 9561 9-1 1 95850 bp Feature: gene Location: 1195863-1196114 bp Ori: BAU57815.1 Feature: domain Description: BrnA_antitoxin Location: 1195890-1196037 bp Feature: domain Description: BrnA_antitoxin Location: 1 1 95890-1 1 96037 bp Feature: gene Location: 1196374-1196964 bp Ori: BAU57816.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1196404-1196590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 96404-1 1 96590 bp Feature: gene Location: 1197360-1197572 bp Ori: BAU57817.1 Feature: domain Description: HicB Location: 1197372-1197555 bp Feature: domain Description: HicB Location: 1 1 97372-1 1 97555 bp Feature: gene Location: 1197731-1198045 bp Ori: BAU57818.1 Feature: domain Description: Y1_Tnp Location: 1197740-1198031 bp Feature: domain Description: Y1 _Tnp Location: 1 1 97740-1 1 98031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Abi_C (pfam14355), DUF3800 (pfam12686), RVT-GII, Mrr (COG1715), AAA_21 (pfam13304), PLDc_Bfil_DEXD_like (cd09117), HigB (COG4680), antidote_HigA (TIGR02607), BrnT_toxin (pfam04365), BrnA_antitoxin (pfam14384)
HicB (pfam05534), Y1_Tnp (pfam01797)