myRT

myRT report for GCA_002393365.1_ASM239336v1

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Seq: CP023535.1 Escherichia coli strain FDAARGOS_403 chromosome, complete genome (5277336 bp)
Overview 1 RT 1: 2198765-2206215 bp 2 RT 2: 2216697-2220234 bp 3 RT 3: 3621483-3629247 bp 4 RT 4: 3645387-3648886 bp 5 RT 5: 3841763-3845402 bp Neighborhood of RT #1 [2198765, 2206215] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [2216697, 2220233] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [3621483, 3629249] InsE RVT-GII GIIM PHA02517 Peptidase_S6 autotrans_barl Neighborhood of RT #4 [3645387, 3649286] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #5 [3841763, 3845569] InsE RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 2198765-2199190 bp Feature: domain Description: PHA02517 Location: 2198855-2199191 bp Feature: domain Description: PHA0251 7 Location: 21 98855-21 991 91 bp Feature: gene Location: 2199123-2199554 bp Feature: gene Location: 2199848-2201371 bp Ori: ATG11714.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2200121-2200853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22001 21 -2200853 bp Feature: domain Description: GIIM Note: maturase Location: 2200928-2201126 bp Feature: domain Description: GIIM Note: maturase Location: 2200928-2201 1 26 bp Feature: gene Location: 2201461-2201934 bp Feature: domain Description: PHA02517 Location: 2201467-2201932 bp Feature: domain Description: PHA0251 7 Location: 2201 467-2201 932 bp Feature: gene Location: 2202099-2206215 bp Feature: gene Location: 2216697-2216786 bp Feature: gene Location: 2216752-2217225 bp Feature: domain Description: PHA02517 Location: 2216758-2217223 bp Feature: domain Description: PHA0251 7 Location: 221 6758-221 7223 bp Feature: gene Location: 2217315-2218838 bp Ori: ATG11723.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2217588-2218320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 7588-221 8320 bp Feature: domain Description: GIIM Note: maturase Location: 2218395-2218593 bp Feature: domain Description: GIIM Note: maturase Location: 221 8395-221 8593 bp Feature: gene Location: 2219132-2219503 bp Feature: gene Location: 2219496-2220233 bp Feature: domain Description: PHA02517 Location: 2219880-2220234 bp Feature: domain Description: PHA0251 7 Location: 221 9880-2220234 bp Feature: gene Location: 3621483-3622222 bp Feature: domain Description: InsE Location: 3621486-3621822 bp Feature: domain Description: InsE Location: 3621 486-3621 822 bp Feature: gene Location: 3622215-3622586 bp Feature: gene Location: 3622880-3624403 bp Ori: ATG13033.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3623153-3623885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36231 53-3623885 bp Feature: domain Description: GIIM Note: maturase Location: 3623960-3624158 bp Feature: domain Description: GIIM Note: maturase Location: 3623960-36241 58 bp Feature: gene Location: 3624493-3624966 bp Feature: domain Description: PHA02517 Location: 3624499-3624964 bp Feature: domain Description: PHA0251 7 Location: 3624499-3624964 bp Feature: gene Location: 3625131-3629249 bp Ori: ATG13034.1 Feature: domain Description: Peptidase_S6 Location: 3625284-3627456 bp Feature: domain Description: Peptidase_S6 Location: 3625284-3627456 bp Feature: domain Description: autotrans_barl Location: 3628020-3629247 bp Feature: domain Description: autotrans_barl Location: 3628020-3629247 bp Feature: gene Location: 3645387-3645600 bp Feature: gene Location: 3645803-3646276 bp Feature: domain Description: PHA02517 Location: 3645809-3646274 bp Feature: domain Description: PHA0251 7 Location: 3645809-3646274 bp Feature: gene Location: 3646366-3647889 bp Ori: ATG13046.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3646639-3647371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3646639-3647371 bp Feature: domain Description: GIIM Note: maturase Location: 3647446-3647644 bp Feature: domain Description: GIIM Note: maturase Location: 3647446-3647644 bp Feature: gene Location: 3648183-3648554 bp Feature: gene Location: 3648547-3649286 bp Feature: domain Description: InsE Location: 3648550-3648886 bp Feature: domain Description: InsE Location: 3648550-3648886 bp Feature: gene Location: 3841763-3842480 bp Feature: domain Description: InsE Location: 3841802-3842051 bp Feature: domain Description: InsE Location: 3841 802-3842051 bp Feature: gene Location: 3842407-3842844 bp Feature: gene Location: 3843138-3844661 bp Ori: ATG13231.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3843411-3844143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384341 1 -38441 43 bp Feature: domain Description: GIIM Note: maturase Location: 3844218-3844416 bp Feature: domain Description: GIIM Note: maturase Location: 384421 8-384441 6 bp Feature: gene Location: 3844742-3845229 bp Feature: domain Description: PHA02517 Location: 3844745-3844916 bp Feature: domain Description: PHA0251 7 Location: 3844745-384491 6 bp Feature: gene Location: 3845156-3845569 bp Ori: ATG13232.1 Feature: domain Description: COG2085 Location: 3845255-3845402 bp Feature: domain Description: COG2085 Location: 3845255-3845402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: CP023533.1 Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence (75566 bp)
Overview 1 RT 1: 30396-34022 bp Neighborhood of RT #1 [30396, 34022] YkfC InsG RVT-GII GIIM PHA02517 Feature: gene Location: 30396-30551 bp Ori: ATG09462.1 Feature: domain Description: YkfC Location: 30405-30546 bp Feature: domain Description: YkfC Location: 30405-30546 bp Feature: gene Location: 30718-31830 bp Ori: ATG09463.1 Feature: domain Description: InsG Location: 30721-31759 bp Feature: domain Description: InsG Location: 3072 1-31759 bp Feature: gene Location: 31887-33269 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32019-32751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 019-32 751 bp Feature: domain Description: GIIM Note: maturase Location: 32826-33024 bp Feature: domain Description: GIIM Note: maturase Location: 32 82 6-3302 4 bp Feature: gene Location: 33359-33832 bp Feature: domain Description: PHA02517 Location: 33365-33830 bp Feature: domain Description: PHA02 517 Location: 33365-33830 bp Feature: gene Location: 33798-34022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), InsG (COG3385), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)