myRT

myRT report for GCA_002393465.1_ASM239346v1

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Seq: CP023531.1 Escherichia coli strain FDAARGOS_401 chromosome, complete genome (5311821 bp)
Overview 1 RT 1: 3608009-3611386 bp 2 RT 2: 3806326-3810225 bp 3 RT 3: 5239326-5246777 bp Neighborhood of RT #1 [3608009, 3611815] COG2085 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [3806326, 3810225] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #3 [5239326, 5246776] Peptidase_S6 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 3608009-3608422 bp Ori: ATG07631.1 Feature: domain Description: COG2085 Location: 3608108-3608255 bp Feature: domain Description: COG2085 Location: 36081 08-3608255 bp Feature: gene Location: 3608349-3608836 bp Feature: domain Description: PHA02517 Location: 3608352-3608523 bp Feature: domain Description: PHA0251 7 Location: 3608352-3608523 bp Feature: gene Location: 3608917-3610440 bp Ori: ATG07632.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3609190-3609922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36091 90-3609922 bp Feature: domain Description: GIIM Note: maturase Location: 3609997-3610195 bp Feature: domain Description: GIIM Note: maturase Location: 3609997-361 01 95 bp Feature: gene Location: 3610734-3611171 bp Feature: gene Location: 3611098-3611815 bp Feature: domain Description: InsE Location: 3611137-3611386 bp Feature: domain Description: InsE Location: 361 1 1 37-361 1 386 bp Feature: gene Location: 3806326-3807065 bp Feature: domain Description: InsE Location: 3806329-3806665 bp Feature: domain Description: InsE Location: 3806329-3806665 bp Feature: gene Location: 3807058-3807429 bp Feature: gene Location: 3807723-3809246 bp Ori: ATG07817.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3807996-3808728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3807996-3808728 bp Feature: domain Description: GIIM Note: maturase Location: 3808803-3809001 bp Feature: domain Description: GIIM Note: maturase Location: 3808803-3809001 bp Feature: gene Location: 3809336-3809809 bp Feature: domain Description: PHA02517 Location: 3809342-3809807 bp Feature: domain Description: PHA0251 7 Location: 3809342-3809807 bp Feature: gene Location: 3810012-3810225 bp Feature: gene Location: 5239326-5242420 bp Feature: domain Description: Peptidase_S6 Location: 5239347-5239881 bp Feature: domain Description: Peptidase_S6 Location: 5239347-5239881 bp Feature: gene Location: 5243607-5244080 bp Feature: domain Description: PHA02517 Location: 5243613-5244078 bp Feature: domain Description: PHA0251 7 Location: 524361 3-5244078 bp Feature: gene Location: 5244170-5245693 bp Ori: ATG09128.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5244443-5245175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5244443-52451 75 bp Feature: domain Description: GIIM Note: maturase Location: 5245250-5245448 bp Feature: domain Description: GIIM Note: maturase Location: 5245250-5245448 bp Feature: gene Location: 5245987-5246418 bp Feature: gene Location: 5246351-5246776 bp Feature: domain Description: PHA02517 Location: 5246441-5246777 bp Feature: domain Description: PHA0251 7 Location: 5246441 -5246777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2085 (Predicted dinucleotide-binding enzyme ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), Peptidase_S6 (pfam02395)

Seq: CP023530.1 Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence (75554 bp)
Overview 1 RT 1: 12523-16149 bp Neighborhood of RT #1 [12523, 16149] YkfC InsG RVT-GII GIIM PHA02517 Feature: gene Location: 12523-12678 bp Ori: ATG04194.1 Feature: domain Description: YkfC Location: 12532-12673 bp Feature: domain Description: YkfC Location: 12 532 -12 673 bp Feature: gene Location: 12845-13957 bp Ori: ATG04195.1 Feature: domain Description: InsG Location: 12848-13886 bp Feature: domain Description: InsG Location: 12 848-13886 bp Feature: gene Location: 14014-15396 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14146-14878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14146-14878 bp Feature: domain Description: GIIM Note: maturase Location: 14953-15151 bp Feature: domain Description: GIIM Note: maturase Location: 14953-15151 bp Feature: gene Location: 15486-15959 bp Feature: domain Description: PHA02517 Location: 15492-15957 bp Feature: domain Description: PHA02 517 Location: 15492 -15957 bp Feature: gene Location: 15925-16149 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), InsG (COG3385), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)