myRT

myRT report for GCA_002441955.1_ASM244195v1

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Seq: CP023669.1 Methylomonas koyamae strain LM6 chromosome, complete genome (4894002 bp)
Overview 1 RT 1: 1963985-1973270 bp 2 RT 2: 2531812-2542974 bp 3 RT 3: 3137271-3142504 bp Neighborhood of RT #1 [1963985, 1973311] PBP2_SsuA_like_6 HAMP PRK09776 sensory_box PRK09776 RVT-GII GIIM mepA SUL1 Neighborhood of RT #2 [2531812, 2542985] PRK15098 MFS_FucP_like RVT-GII GIIM PRK09776 PRK09776 GAF_2 PRK11359 PRK11359 nitrilase_Rim1_like Neighborhood of RT #3 [3137271, 3142521] RpfG ElaA RVT-GII GIIM GstA Feature: gene Location: 1963985-1964989 bp Ori: ATG90037.1 Feature: domain Description: PBP2_SsuA_like_6 Location: 1964108-1964720 bp Feature: domain Description: PBP2_SsuA_like_6 Location: 1 9641 08-1 964720 bp Feature: gene Location: 1964986-1968579 bp Ori: ATG90038.1 Feature: domain Description: HAMP Location: 1965613-1965742 bp Feature: domain Description: HAMP Location: 1 96561 3-1 965742 bp Feature: domain Description: PRK09776 Location: 1965760-1966159 bp Feature: domain Description: PRK09776 Location: 1 965760-1 9661 59 bp Feature: domain Description: sensory_box Location: 1966168-1966534 bp Feature: domain Description: sensory_box Location: 1 9661 68-1 966534 bp Feature: domain Description: PRK09776 Location: 1966681-1968541 bp Feature: domain Description: PRK09776 Location: 1 966681 -1 968541 bp Feature: gene Location: 1969162-1970448 bp Ori: ATG90039.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969495-1970119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 969495-1 9701 1 9 bp Feature: domain Description: GIIM Note: maturase Location: 1970164-1970374 bp Feature: domain Description: GIIM Note: maturase Location: 1 9701 64-1 970374 bp Feature: gene Location: 1970594-1971676 bp Ori: ATG90040.1 Feature: domain Description: mepA Location: 1970876-1971671 bp Feature: domain Description: mepA Location: 1 970876-1 971 671 bp Feature: gene Location: 1971689-1973311 bp Ori: ATG90041.1 Feature: domain Description: SUL1 Location: 1971746-1973270 bp Feature: domain Description: SUL1 Location: 1 971 746-1 973270 bp Feature: gene Location: 2531812-2534070 bp Ori: ATG90475.1 Feature: domain Description: PRK15098 Location: 2531860-2534050 bp Feature: domain Description: PRK1 5098 Location: 2531 860-2534050 bp Feature: gene Location: 2534092-2535369 bp Ori: ATG90476.1 Feature: domain Description: MFS_FucP_like Location: 2534128-2535337 bp Feature: domain Description: MFS_FucP_like Location: 25341 28-2535337 bp Feature: gene Location: 2535850-2537160 bp Ori: ATG90477.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2536183-2536807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25361 83-2536807 bp Feature: domain Description: GIIM Note: maturase Location: 2536852-2537062 bp Feature: domain Description: GIIM Note: maturase Location: 2536852-2537062 bp Feature: gene Location: 2537578-2542083 bp Ori: ATG90478.1 Feature: domain Description: PRK09776 Location: 2537710-2537965 bp Feature: domain Description: PRK09776 Location: 253771 0-2537965 bp Feature: domain Description: PRK09776 Location: 2538001-2538721 bp Feature: domain Description: PRK09776 Location: 2538001 -2538721 bp Feature: domain Description: GAF_2 Location: 2538991-2539153 bp Feature: domain Description: GAF_2 Location: 2538991 -25391 53 bp Feature: domain Description: PRK11359 Location: 2539213-2539546 bp Feature: domain Description: PRK1 1 359 Location: 253921 3-2539546 bp Feature: domain Description: PRK11359 Location: 2539597-2542063 bp Feature: domain Description: PRK1 1 359 Location: 2539597-2542063 bp Feature: gene Location: 2542125-2542985 bp Ori: ATG90479.1 Feature: domain Description: nitrilase_Rim1_like Location: 2542134-2542974 bp Feature: domain Description: nitrilase_Rim1 _like Location: 25421 34-2542974 bp Feature: gene Location: 3137271-3138269 bp Ori: ATG90986.1 Feature: domain Description: RpfG Location: 3137283-3138231 bp Feature: domain Description: RpfG Location: 31 37283-31 38231 bp Feature: gene Location: 3138346-3139308 bp Ori: ATG90987.1 Feature: domain Description: ElaA Location: 3138403-3138772 bp Feature: domain Description: ElaA Location: 31 38403-31 38772 bp Feature: gene Location: 3139494-3140804 bp Ori: ATG90988.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3139827-3140451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 39827-31 40451 bp Feature: domain Description: GIIM Note: maturase Location: 3140496-3140706 bp Feature: domain Description: GIIM Note: maturase Location: 31 40496-31 40706 bp Feature: gene Location: 3141640-3141804 bp Feature: gene Location: 3141898-3142521 bp Ori: ATG90990.1 Feature: domain Description: GstA Location: 3141904-3142504 bp Feature: domain Description: GstA Location: 31 41 904-31 42504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_SsuA_like_6 (cd13563), HAMP (smart00304), PRK09776 (putative diguanylate cyclase; Provisional), sensory_box (TIGR00229), RVT-GII, GIIM (pfam08388), mepA (PRK09429), SUL1 (COG0659), PRK15098 (beta-glucosidase BglX), MFS_FucP_like (cd17394)
GAF_2 (pfam13185), PRK11359 (cyclic-di-GMP phosphodiesterase; Provisional), nitrilase_Rim1_like (cd07574), RpfG (COG3437), ElaA (COG2153), GstA (COG0625)