myRT

myRT report for GCA_002442955.1_ASM244295v1

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Seq: CP018128.1 Enterococcus faecium strain A_020709_82, complete genome (2740566 bp)
Overview 1 RT 1: 1730152-1740748 bp 2 RT 2: 2606753-2618296 bp Neighborhood of RT #1 [1730152, 1740768] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Dcm RVT-GII HNHc FtsK Neighborhood of RT #2 [2606753, 2618310] FtsK RVT-GII HNHc Zeta_toxin HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 1730152-1730652 bp Feature: domain Description: ArdA Location: 1730170-1730641 bp Feature: domain Description: ArdA Location: 1 7301 70-1 730641 bp Feature: gene Location: 1730665-1730817 bp Feature: gene Location: 1730993-1732903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1731326-1732064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 731 326-1 732064 bp Feature: domain Description: HNHc Note: nucleases Location: 1732619-1732784 bp Feature: domain Description: HNHc Note: nucleases Location: 1 73261 9-1 732784 bp Feature: gene Location: 1733412-1733561 bp Feature: gene Location: 1733783-1734967 bp Feature: domain Description: HTH_XRE Location: 1733813-1733957 bp Feature: domain Description: HTH_XRE Location: 1 73381 3-1 733957 bp Feature: domain Description: Rol_Rep_N Location: 1733990-1734254 bp Feature: domain Description: Rol_Rep_N Location: 1 733990-1 734254 bp Feature: domain Description: Rep_trans Location: 1734278-1734890 bp Feature: domain Description: Rep_trans Location: 1 734278-1 734890 bp Feature: gene Location: 1735502-1736644 bp Feature: domain Description: Dcm Location: 1735505-1736624 bp Feature: domain Description: Dcm Location: 1 735505-1 736624 bp Feature: gene Location: 1736704-1736955 bp Feature: gene Location: 1737049-1738908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1737358-1738099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 737358-1 738099 bp Feature: domain Description: HNHc Note: nucleases Location: 1738654-1738792 bp Feature: domain Description: HNHc Note: nucleases Location: 1 738654-1 738792 bp Feature: gene Location: 1739027-1739257 bp Feature: gene Location: 1739623-1740768 bp Feature: domain Description: FtsK Location: 1740283-1740748 bp Feature: domain Description: FtsK Location: 1 740283-1 740748 bp Feature: gene Location: 2606753-2607919 bp Feature: domain Description: FtsK Location: 2607434-2607899 bp Feature: domain Description: FtsK Location: 2607434-2607899 bp Feature: gene Location: 2608285-2608515 bp Feature: gene Location: 2608634-2610493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2608943-2609684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2608943-2609684 bp Feature: domain Description: HNHc Note: nucleases Location: 2610239-2610377 bp Feature: domain Description: HNHc Note: nucleases Location: 261 0239-261 0377 bp Feature: gene Location: 2610587-2610826 bp Feature: gene Location: 2610904-2611578 bp Feature: domain Description: Zeta_toxin Location: 2611003-2611486 bp Feature: domain Description: Zeta_toxin Location: 261 1 003-261 1 486 bp Feature: gene Location: 2613256-2613399 bp Feature: gene Location: 2613492-2614676 bp Feature: domain Description: HTH_XRE Location: 2613522-2613666 bp Feature: domain Description: HTH_XRE Location: 261 3522-261 3666 bp Feature: domain Description: Rol_Rep_N Location: 2613699-2613963 bp Feature: domain Description: Rol_Rep_N Location: 261 3699-261 3963 bp Feature: domain Description: Rep_trans Location: 2613987-2614599 bp Feature: domain Description: Rep_trans Location: 261 3987-261 4599 bp Feature: gene Location: 2615556-2617466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2615889-2616627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 5889-261 6627 bp Feature: domain Description: HNHc Note: nucleases Location: 2617182-2617347 bp Feature: domain Description: HNHc Note: nucleases Location: 261 71 82-261 7347 bp Feature: gene Location: 2617654-2617794 bp Feature: gene Location: 2617807-2618310 bp Feature: domain Description: ArdA Location: 2617825-2618296 bp Feature: domain Description: ArdA Location: 261 7825-261 8296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), Dcm (COG0270), FtsK (COG1674), Zeta_toxin (pfam06414)

Seq: CP018130.1 Enterococcus faecium strain A_020709_82 plasmid unnamed2, complete sequence (71104 bp)
Overview 1 RT 1: 35917-41497 bp Neighborhood of RT #1 [35917, 42252] T4SS-DNA_transf T4SS-DNA_transf RVT-GII HNH_4 TraG-D_C Feature: gene Location: 35917-36633 bp Feature: gene Location: 36646-38463 bp Feature: domain Description: T4SS-DNA_transf Location: 37243-37975 bp Feature: domain Description: T4SS-DNA_transf Location: 372 43-37975 bp Feature: domain Description: T4SS-DNA_transf Location: 38236-38440 bp Feature: domain Description: T4SS-DNA_transf Location: 382 36-38440 bp Feature: gene Location: 39158-41074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39497-40232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39497-402 32 bp Feature: domain Description: HNH_4 Location: 40826-40931 bp Feature: domain Description: HNH_4 Location: 4082 6-40931 bp Feature: gene Location: 41121-41255 bp Feature: gene Location: 41245-42252 bp Feature: domain Description: TraG-D_C Location: 41257-41497 bp Feature: domain Description: TraG-D_C Location: 412 57-41497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), RVT-GII, HNH_4 (pfam13395), TraG-D_C (pfam12696)