myRT

myRT report for GCA_002568625.1_ASM256862v1

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Seq: CP023778.1 Nocardia terpenica strain NC_YFY_NT001 chromosome, complete genome (8847159 bp)
Overview 1 RT 1: 2333751-2338696 bp 2 RT 2: 3082873-3087374 bp Neighborhood of RT #1 [2333751, 2339367] AcrR DUF998 RVT-GII GIIM HTH_26 Neighborhood of RT #2 [3082873, 3087388] Tra8 RVT-GII GIIM PhdYeFM_antitox MhpD Feature: gene Location: 2333751-2333873 bp Feature: domain Description: AcrR Location: 2333778-2333871 bp Feature: domain Description: AcrR Location: 2333778-2333871 bp Feature: gene Location: 2334454-2335146 bp Ori: ATL66562.1 Feature: domain Description: DUF998 Location: 2334541-2335108 bp Feature: domain Description: DUF998 Location: 2334541 -23351 08 bp Feature: gene Location: 2336008-2337432 bp Ori: ATL71662.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2336266-2336965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2336266-2336965 bp Feature: domain Description: GIIM Note: maturase Location: 2337052-2337271 bp Feature: domain Description: GIIM Note: maturase Location: 2337052-2337271 bp Feature: gene Location: 2338055-2338270 bp Feature: gene Location: 2338483-2339367 bp Ori: ATL66564.1 Feature: domain Description: HTH_26 Location: 2338540-2338696 bp Feature: domain Description: HTH_26 Location: 2338540-2338696 bp Feature: gene Location: 3082873-3083271 bp Feature: domain Description: Tra8 Location: 3082900-3083239 bp Feature: domain Description: Tra8 Location: 3082900-3083239 bp Feature: gene Location: 3083302-3083736 bp Feature: gene Location: 3084451-3085875 bp Ori: ATL71765.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3084709-3085408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3084709-3085408 bp Feature: domain Description: GIIM Note: maturase Location: 3085495-3085714 bp Feature: domain Description: GIIM Note: maturase Location: 3085495-308571 4 bp Feature: gene Location: 3086162-3086488 bp Ori: ATL67090.1 Feature: domain Description: PhdYeFM_antitox Location: 3086174-3086375 bp Feature: domain Description: PhdYeFM_antitox Location: 30861 74-3086375 bp Feature: gene Location: 3086534-3087388 bp Ori: ATL67091.1 Feature: domain Description: MhpD Location: 3086687-3087374 bp Feature: domain Description: MhpD Location: 3086687-3087374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), DUF998 (pfam06197), RVT-GII, GIIM (pfam08388), HTH_26 (pfam13443), Tra8 (COG2826), PhdYeFM_antitox (pfam02604), MhpD (COG3971)