myRT

myRT report for GCA_002587165.1_ASM258716v1

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Seq: CP023942.1 Klebsiella pneumoniae strain FDAARGOS_444 plasmid unnamed2 (187926 bp)
Overview 1 RT 1: 55156-59358 bp 2 RT 2: 131748-135390 bp Neighborhood of RT #1 [55156, 59375] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Neighborhood of RT #2 [131748, 135515] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 55156-55827 bp Ori: ATM62789.1 Feature: domain Description: Plasmid_stab_B Location: 55171-55378 bp Feature: domain Description: Plasmid_stab_B Location: 551 71 -55378 bp Feature: domain Description: Plasmid_stab_B Location: 55483-55690 bp Feature: domain Description: Plasmid_stab_B Location: 55483-55690 bp Feature: gene Location: 55830-56801 bp Ori: ATM62790.1 Feature: domain Description: StbA Location: 55833-56778 bp Feature: domain Description: StbA Location: 55833-56778 bp Feature: gene Location: 57050-58534 bp Ori: ATM62791.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57452-58142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57452-581 42 bp Feature: gene Location: 58534-58785 bp Feature: gene Location: 58944-59375 bp Ori: ATM62793.1 Feature: domain Description: PRK10276 Location: 58995-59358 bp Feature: domain Description: PRK1 0276 Location: 58995-59358 bp Feature: gene Location: 131748-131867 bp Feature: gene Location: 132012-132187 bp Feature: gene Location: 132924-134591 bp Ori: ATM62871.1 Gene: ltrA Feature: domain Description: RVT_N Location: 132972-133209 bp Feature: domain Description: RVT_N Location: 1 32972-1 33209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133260-133902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 33260-1 33902 bp Feature: domain Description: GIIM Note: maturase Location: 133953-134187 bp Feature: domain Description: GIIM Note: maturase Location: 1 33953-1 341 87 bp Feature: domain Description: HNHc Note: nucleases Location: 134397-134556 bp Feature: domain Description: HNHc Note: nucleases Location: 1 34397-1 34556 bp Feature: gene Location: 134905-135096 bp Feature: gene Location: 135093-135515 bp Ori: ATM62873.1 Feature: domain Description: DUF1380 Location: 135096-135390 bp Feature: domain Description: DUF1 380 Location: 1 35096-1 35390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT_N (pfam13655), GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: CP023941.1 Klebsiella pneumoniae strain FDAARGOS_444 chromosome, complete genome (5484708 bp)
Overview 1 RT 1: 1144889-1149774 bp 2 RT 2: 1308931-1311707 bp 3 RT 3: 1770496-1774214 bp 4 RT 4: 1791109-1797371 bp 5 RT 5: 3034710-3039239 bp 6 RT 6: 3186000-3190099 bp 7 RT 7: 3258832-3263094 bp 8 RT 8: 3618471-3623309 bp Neighborhood of RT #1 [1144889, 1149779] Phage_GPA RVT-GII DinI Neighborhood of RT #2 [1308931, 1311707] RVT-GII Neighborhood of RT #3 [1770496, 1774225] dacD RVT-GII PRK10016 Neighborhood of RT #4 [1791109, 1797371] STKc_PknB_like RVT-Retrons AAA_15 Neighborhood of RT #5 [3034710, 3039280] umuC PRK10276 RVT-GII XerC Neighborhood of RT #6 [3186000, 3190110] umuC PRK10276 RVT-GII DinI Neighborhood of RT #7 [3258832, 3263132] PRK10597 RVT-GII PRK05318 Neighborhood of RT #8 [3618471, 3623359] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 1144889-1147273 bp Ori: ATM58534.1 Feature: domain Description: Phage_GPA Location: 1145453-1146419 bp Feature: domain Description: Phage_GPA Location: 1145453-1146419 bp Feature: gene Location: 1147503-1147754 bp Feature: gene Location: 1147754-1149238 bp Ori: ATM58536.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1148156-1148846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1148156-1148846 bp Feature: gene Location: 1149346-1149534 bp Feature: gene Location: 1149546-1149779 bp Ori: ATM58537.1 Feature: domain Description: DinI Location: 1149591-1149774 bp Feature: domain Description: DinI Location: 1149591-1149774 bp Feature: gene Location: 1308931-1309134 bp Feature: gene Location: 1309127-1309465 bp Feature: gene Location: 1309562-1311046 bp Ori: ATM58694.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1309964-1310654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1309964-1310654 bp Feature: gene Location: 1311046-1311297 bp Feature: gene Location: 1311450-1311707 bp Feature: gene Location: 1770496-1771665 bp Ori: ATM59076.1 Feature: domain Description: dacD Location: 1770505-1771660 bp Feature: domain Description: dacD Location: 1770505-1771660 bp Feature: gene Location: 1771935-1772186 bp Feature: gene Location: 1772186-1773670 bp Ori: ATM59078.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1772588-1773278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1772 588-17732 78 bp Feature: gene Location: 1773616-1773843 bp Feature: gene Location: 1773752-1774225 bp Ori: ATM59080.1 Feature: domain Description: PRK10016 Location: 1773755-1774214 bp Feature: domain Description: PRK10016 Location: 1773755-17742 14 bp Feature: gene Location: 1791109-1792212 bp Ori: ATM59101.1 Feature: domain Description: STKc_PknB_like Location: 1791241-1791682 bp Feature: domain Description: STKc_PknB_like Location: 17912 41-1791682 bp Feature: gene Location: 1792282-1792524 bp Feature: gene Location: 1792771-1793871 bp Ori: ATM59102.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1792954-1793482 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1792 954-1793482 bp Feature: gene Location: 1793986-1796262 bp Ori: ATM59103.1 Feature: domain Description: AAA_15 Location: 1794019-1795027 bp Feature: domain Description: AAA_15 Location: 1794019-179502 7 bp Feature: gene Location: 1797141-1797371 bp Feature: gene Location: 3034710-3035975 bp Ori: ATM60270.1 Feature: domain Description: umuC Location: 3034713-3035973 bp Feature: domain Description: umuC Location: 3034713-3035973 bp Feature: gene Location: 3035977-3036396 bp Ori: ATM60271.1 Feature: domain Description: PRK10276 Location: 3035980-3036391 bp Feature: domain Description: PRK102 76 Location: 3035980-3036391 bp Feature: gene Location: 3036476-3037960 bp Ori: ATM60272.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3036878-3037568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3036878-3037568 bp Feature: gene Location: 3037960-3038211 bp Feature: gene Location: 3038858-3039280 bp Ori: ATM60274.1 Feature: domain Description: XerC Location: 3038894-3039239 bp Feature: domain Description: XerC Location: 3038894-30392 39 bp Feature: gene Location: 3186000-3187265 bp Ori: ATM60418.1 Feature: domain Description: umuC Location: 3186003-3187263 bp Feature: domain Description: umuC Location: 3186003-31872 63 bp Feature: gene Location: 3187268-3187687 bp Ori: ATM60419.1 Feature: domain Description: PRK10276 Location: 3187271-3187682 bp Feature: domain Description: PRK102 76 Location: 31872 71-3187682 bp Feature: gene Location: 3187766-3189250 bp Ori: ATM60420.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3188168-3188858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3188168-3188858 bp Feature: gene Location: 3189250-3189501 bp Feature: gene Location: 3189868-3190110 bp Ori: ATM60422.1 Feature: domain Description: DinI Location: 3189919-3190099 bp Feature: domain Description: DinI Location: 3189919-3190099 bp Feature: gene Location: 3258832-3259122 bp Feature: gene Location: 3259134-3259367 bp Ori: ATM60494.1 Feature: domain Description: PRK10597 Location: 3259137-3259362 bp Feature: domain Description: PRK10597 Location: 32 59137-32 59362 bp Feature: gene Location: 3259446-3260930 bp Ori: ATM60495.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3259848-3260538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 59848-32 60538 bp Feature: gene Location: 3260930-3261181 bp Feature: gene Location: 3261771-3263132 bp Ori: ATM60497.1 Feature: domain Description: PRK05318 Location: 3261795-3263094 bp Feature: domain Description: PRK05318 Location: 32 61795-32 63094 bp Feature: gene Location: 3618471-3619349 bp Ori: ATM60832.1 Feature: domain Description: Phage_CI_repr Location: 3618498-3618681 bp Feature: domain Description: Phage_CI_repr Location: 3618498-3618681 bp Feature: domain Description: Phage_CI_repr Location: 3618810-3619002 bp Feature: domain Description: Phage_CI_repr Location: 3618810-3619002 bp Feature: domain Description: Phage_CI_C Location: 3619029-3619323 bp Feature: domain Description: Phage_CI_C Location: 361902 9-361932 3 bp Feature: gene Location: 3619361-3620305 bp Feature: gene Location: 3620404-3621888 bp Ori: ATM60834.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3620806-3621496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362 0806-362 1496 bp Feature: gene Location: 3621888-3622139 bp Feature: gene Location: 3622307-3623359 bp Ori: ATM60836.1 Feature: domain Description: int Location: 3622310-3623309 bp Feature: domain Description: int Location: 362 2 310-362 3309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)
XerC (COG4973), PRK10597 (DNA damage-inducible protein I; Provisional), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)

Seq: CP023943.1 Klebsiella pneumoniae strain FDAARGOS_444 plasmid unnamed1, complete sequence (196733 bp)
Overview 1 RT 1: 16621-19716 bp 2 RT 2: 123615-126877 bp Neighborhood of RT #1 [16621, 20110] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [123615, 126877] PRK10276 RVT-GII Feature: gene Location: 16621-16833 bp Feature: gene Location: 16981-17160 bp Feature: domain Description: PHA02517 Location: 16984-17161 bp Feature: domain Description: PHA02517 Location: 16984-17161 bp Feature: gene Location: 17241-18764 bp Ori: ATM62953.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17514-18246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17514-18246 bp Feature: domain Description: GIIM Note: maturase Location: 18321-18519 bp Feature: domain Description: GIIM Note: maturase Location: 183 21-18519 bp Feature: gene Location: 19058-19495 bp Feature: gene Location: 19422-20110 bp Feature: domain Description: InsE Location: 19431-19716 bp Feature: domain Description: InsE Location: 1943 1-19716 bp Feature: gene Location: 123615-124040 bp Ori: ATM63039.1 Feature: domain Description: PRK10276 Location: 123618-124026 bp Feature: domain Description: PRK10276 Location: 123 618-124026 bp Feature: gene Location: 124195-124446 bp Feature: gene Location: 124446-125930 bp Ori: ATM63041.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124848-125538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124848-12553 8 bp Feature: gene Location: 126164-126394 bp Feature: gene Location: 126696-126877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)