myRT

myRT report for GCA_002587885.1_ASM258788v1

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Seq: CP023947.1 Klebsiella pneumoniae strain FDAARGOS_446 plasmid unnamed2, complete sequence (153385 bp)
Overview 1 RT 1: 102957-106141 bp Neighborhood of RT #1 [102957, 106141] PRK10276 RVT-GII Feature: gene Location: 102957-103382 bp Ori: ATM68416.1 Feature: domain Description: PRK10276 Location: 102960-103368 bp Feature: domain Description: PRK1 0276 Location: 1 02960-1 03368 bp Feature: gene Location: 103536-103787 bp Feature: gene Location: 103787-105295 bp Ori: ATM68418.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104189-104903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 041 89-1 04903 bp Feature: gene Location: 105529-105759 bp Feature: gene Location: 105929-106141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CP023946.1 Klebsiella pneumoniae strain FDAARGOS_446 chromosome, complete genome (5392753 bp)
Overview 1 RT 1: 914123-917606 bp 2 RT 2: 1250985-1255093 bp 3 RT 3: 1384198-1388766 bp 4 RT 4: 1465943-1468917 bp 5 RT 5: 2673695-2679273 bp 6 RT 6: 2709955-2713679 bp Neighborhood of RT #1 [914123, 917611] int RVT-GII DinI Neighborhood of RT #2 [1250985, 1255095] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1384198, 1388768] XerC RVT-GII PRK10276 umuC Neighborhood of RT #4 [1465943, 1468922] RVT-GII PRK10597 Neighborhood of RT #5 [2673695, 2679449] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Neighborhood of RT #6 [2709955, 2713684] PRK10016 RVT-GII dacD Feature: gene Location: 914123-915175 bp Ori: ATM63968.1 Feature: domain Description: int Location: 914126-915125 bp Feature: domain Description: int Location: 91412 6-91512 5 bp Feature: gene Location: 915343-915594 bp Feature: gene Location: 915594-917078 bp Ori: ATM63970.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915996-916686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915996-916686 bp Feature: gene Location: 917179-917367 bp Feature: gene Location: 917306-917611 bp Ori: ATM63972.1 Feature: domain Description: DinI Location: 917420-917606 bp Feature: domain Description: DinI Location: 91742 0-917606 bp Feature: gene Location: 1250985-1251227 bp Ori: ATM64280.1 Feature: domain Description: DinI Location: 1251036-1251216 bp Feature: domain Description: DinI Location: 12 51036-12 512 16 bp Feature: gene Location: 1251594-1251845 bp Feature: gene Location: 1251845-1253329 bp Ori: ATM64282.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1252247-1252937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 52 2 47-12 52 937 bp Feature: gene Location: 1253408-1253827 bp Ori: ATM64283.1 Feature: domain Description: PRK10276 Location: 1253411-1253822 bp Feature: domain Description: PRK102 76 Location: 12 53411-12 5382 2 bp Feature: gene Location: 1253830-1255095 bp Ori: ATM64284.1 Feature: domain Description: umuC Location: 1253833-1255093 bp Feature: domain Description: umuC Location: 12 53833-12 55093 bp Feature: gene Location: 1384198-1384620 bp Ori: ATM64407.1 Feature: domain Description: XerC Location: 1384234-1384579 bp Feature: domain Description: XerC Location: 13842 34-1384579 bp Feature: gene Location: 1385267-1385518 bp Feature: gene Location: 1385518-1387002 bp Ori: ATM64409.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1385920-1386610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138592 0-1386610 bp Feature: gene Location: 1387082-1387501 bp Ori: ATM64410.1 Feature: domain Description: PRK10276 Location: 1387085-1387496 bp Feature: domain Description: PRK102 76 Location: 1387085-1387496 bp Feature: gene Location: 1387503-1388768 bp Ori: ATM64411.1 Feature: domain Description: umuC Location: 1387506-1388766 bp Feature: domain Description: umuC Location: 1387506-1388766 bp Feature: gene Location: 1465943-1466152 bp Feature: gene Location: 1466354-1466605 bp Feature: gene Location: 1466605-1468089 bp Ori: ATM64503.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1467007-1467697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1467007-1467697 bp Feature: gene Location: 1468167-1468451 bp Feature: gene Location: 1468674-1468922 bp Ori: ATM64505.1 Feature: domain Description: PRK10597 Location: 1468677-1468917 bp Feature: domain Description: PRK10597 Location: 1468677-1468917 bp Feature: gene Location: 2673695-2673925 bp Feature: gene Location: 2674808-2677084 bp Ori: ATM65632.1 Feature: domain Description: AAA_15 Location: 2674841-2675849 bp Feature: domain Description: AAA_15 Location: 2 674841-2 675849 bp Feature: gene Location: 2677199-2678299 bp Ori: ATM65633.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2677382-2677910 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 677382 -2 677910 bp Feature: gene Location: 2678780-2678935 bp Feature: gene Location: 2678955-2679449 bp Ori: ATM68242.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 2679099-2679273 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 679099-2 6792 73 bp Feature: gene Location: 2709955-2710428 bp Ori: ATM65665.1 Feature: domain Description: PRK10016 Location: 2709958-2710417 bp Feature: domain Description: PRK10016 Location: 2 709958-2 710417 bp Feature: gene Location: 2710337-2710564 bp Feature: gene Location: 2710510-2711994 bp Ori: ATM65667.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2710912-2711602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 710912 -2 711602 bp Feature: gene Location: 2711994-2712245 bp Feature: gene Location: 2712515-2713684 bp Ori: ATM65669.1 Feature: domain Description: dacD Location: 2712524-2713679 bp Feature: domain Description: dacD Location: 2 712 52 4-2 713679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), RVT-GII, DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), XerC (COG4973), PRK10597 (DNA damage-inducible protein I; Provisional), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397)