myRT

myRT report for GCA_002740955.2_ASM274095v2

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Seq: CP035180.1 Klebsiella pneumoniae strain BA33875 plasmid pBA33875_IncFIB, complete sequence (282657 bp)
Overview 1 RT 1: 101970-105051 bp Neighborhood of RT #1 [101970, 105065] DUF1472 RVT-GII PRK10276 Feature: gene Location: 101970-102062 bp Feature: domain Description: DUF1472 Location: 101982-102048 bp Feature: domain Description: DUF1 472 Location: 1 01 982-1 02048 bp Feature: gene Location: 102286-102516 bp Feature: gene Location: 102750-104234 bp Ori: QAT12312.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103152-103842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 031 52-1 03842 bp Feature: gene Location: 104234-104485 bp Feature: gene Location: 104640-105065 bp Ori: QAT12314.1 Gene: umuD Feature: domain Description: PRK10276 Location: 104643-105051 bp Feature: domain Description: PRK1 0276 Location: 1 04643-1 05051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP035179.1 Klebsiella pneumoniae strain BA33875 chromosome, complete genome (5521588 bp)
Overview 1 RT 1: 76273-82396 bp 2 RT 2: 4882559-4886824 bp Neighborhood of RT #1 [76273, 82396] Nuc_deoxyrib_tr RVT-Retrons AAA15 Neighborhood of RT #2 [4882559, 4886829] D PRK09678 RVT-Retrons SmpB PRK10724 Feature: gene Location: 76273-77142 bp Ori: QAT07166.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 76795-76966 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 76795-76966 bp Feature: gene Location: 77162-77317 bp Feature: gene Location: 77798-78898 bp Ori: QAT07167.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 77981-78509 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 77981-78509 bp Feature: gene Location: 79013-81255 bp Feature: domain Description: AAA15 Location: 79022-79535 bp Feature: domain Description: AAA15 Location: 7902 2 -79535 bp Feature: gene Location: 82166-82396 bp Feature: gene Location: 4882559-4883658 bp Feature: domain Description: D Location: 4882574-4882817 bp Feature: domain Description: D Location: 4882 574-4882 817 bp Feature: gene Location: 4883749-4883967 bp Ori: QAT12221.1 Feature: domain Description: PRK09678 Location: 4883752-4883950 bp Feature: domain Description: PRK09678 Location: 4883752 -4883950 bp Feature: gene Location: 4884371-4885144 bp Ori: QAT11455.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4884431-4884968 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4884431-4884968 bp Feature: gene Location: 4885760-4886242 bp Ori: QAT11456.1 Gene: smpB Feature: domain Description: SmpB Location: 4885790-4886234 bp Feature: domain Description: SmpB Location: 4885790-48862 34 bp Feature: gene Location: 4886353-4886829 bp Ori: QAT11457.1 Feature: domain Description: PRK10724 Location: 4886359-4886824 bp Feature: domain Description: PRK1072 4 Location: 4886359-488682 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA15 (COG1106), D (PHA02561), PRK09678 (DNA-binding transcriptional regulator; Provisional), SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: CP035182.1 Klebsiella pneumoniae strain BA33875 plasmid pBA33875_IncR, complete sequence (79592 bp)
Overview 1 RT 1: 6451-9546 bp 2 RT 2: 54565-58362 bp Neighborhood of RT #1 [6451, 9940] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [54565, 58362] PHA02517 RVT-GII Feature: gene Location: 6451-6663 bp Feature: gene Location: 6811-6990 bp Feature: domain Description: PHA02517 Location: 6814-6991 bp Feature: domain Description: PHA02517 Location: 6814-6991 bp Feature: gene Location: 7071-8579 bp Ori: QAT12571.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7329-8061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 29-8061 bp Feature: domain Description: GIIM Note: maturase Location: 8136-8334 bp Feature: domain Description: GIIM Note: maturase Location: 813 6-83 3 4 bp Feature: gene Location: 8888-9256 bp Feature: gene Location: 9252-9940 bp Feature: domain Description: InsE Location: 9261-9546 bp Feature: domain Description: InsE Location: 9261-9546 bp Feature: gene Location: 54565-55637 bp Feature: gene Location: 55918-56097 bp Feature: domain Description: PHA02517 Location: 55921-56098 bp Feature: domain Description: PHA02517 Location: 55921-56098 bp Feature: gene Location: 56178-57357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56184-56841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56184-56841 bp Feature: gene Location: 57539-57700 bp Feature: gene Location: 57994-58362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)