myRT

myRT report for GCA_002741215.1_ASM274121v1

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Seq: CP024239.1 Escherichia coli O15:H11 strain 90-9272 chromosome, complete genome (4906680 bp)
Overview 1 RT 1: 4813244-4816321 bp Neighborhood of RT #1 [4813244, 4816488] DDE_Tnp_1 RVT-GII GIIM COG2085 Feature: gene Location: 4813244-4814026 bp Feature: domain Description: DDE_Tnp_1 Location: 4813250-4813958 bp Feature: domain Description: DDE_Tnp_1 Location: 481 3250-481 3958 bp Feature: gene Location: 4814049-4814189 bp Feature: gene Location: 4814195-4815580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4814330-4815062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481 4330-481 5062 bp Feature: domain Description: GIIM Note: maturase Location: 4815137-4815335 bp Feature: domain Description: GIIM Note: maturase Location: 481 51 37-481 5335 bp Feature: gene Location: 4815775-4815909 bp Feature: gene Location: 4816075-4816488 bp Feature: domain Description: COG2085 Location: 4816174-4816321 bp Feature: domain Description: COG2085 Location: 481 61 74-481 6321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: CP024238.1 Escherichia coli O15:H11 strain 90-9272 plasmid unnamed (274465 bp)
Overview 1 RT 1: 35826-38755 bp 2 RT 2: 233363-236857 bp Neighborhood of RT #1 [35826, 38755] RVT-GII GIIM Neighborhood of RT #2 [233363, 236922] COG3547 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 35826-36029 bp Feature: gene Location: 36522-36689 bp Feature: gene Location: 36700-37893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36850-37501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36850-37501 bp Feature: domain Description: GIIM Note: maturase Location: 37579-37804 bp Feature: domain Description: GIIM Note: maturase Location: 37579-37804 bp Feature: gene Location: 37776-38063 bp Feature: gene Location: 38474-38755 bp Feature: gene Location: 233363-233806 bp Feature: domain Description: COG3547 Location: 233369-233771 bp Feature: domain Description: COG3547 Location: 2 33369-2 33771 bp Feature: gene Location: 233963-234409 bp Feature: domain Description: PHA02517 Location: 233966-234407 bp Feature: domain Description: PHA02 517 Location: 2 33966-2 34407 bp Feature: gene Location: 234526-236049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234799-235531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 34799-2 35531 bp Feature: domain Description: GIIM Note: maturase Location: 235606-235804 bp Feature: domain Description: GIIM Note: maturase Location: 2 35606-2 35804 bp Feature: gene Location: 236003-236428 bp Feature: gene Location: 236641-236922 bp Feature: domain Description: PHA02517 Location: 236647-236857 bp Feature: domain Description: PHA02 517 Location: 2 36647-2 36857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed)