myRT

myRT report for GCA_002741255.1_ASM274125v1

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Seq: CP024241.1 Escherichia coli O114:H49 strain 90-9280 plasmid unnamed1 (104674 bp)
Overview 1 RT 1: 710-4502 bp 2 RT 2: 20052-22981 bp Neighborhood of RT #1 [710, 4502] DUF1281 DUF1281_C RVT-GII GIIM HNHc RVT_N RVT-GII Neighborhood of RT #2 [20052, 22981] RVT-GII GIIM Feature: gene Location: 710-1168 bp Feature: gene Location: 1238-2140 bp Feature: domain Description: DUF1281 Location: 1307-1835 bp Feature: domain Description: DUF1 281 Location: 1 307-1 835 bp Feature: domain Description: DUF1281_C Location: 1841-2081 bp Feature: domain Description: DUF1 281 _C Location: 1 841 -2081 bp Feature: gene Location: 2217-3140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2229-2409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2229-2409 bp Feature: domain Description: GIIM Note: maturase Location: 2463-2694 bp Feature: domain Description: GIIM Note: maturase Location: 2463-2694 bp Feature: domain Description: HNHc Note: nucleases Location: 2925-3084 bp Feature: domain Description: HNHc Note: nucleases Location: 2925-3084 bp Feature: gene Location: 3227-3940 bp Feature: domain Description: RVT_N Location: 3284-3521 bp Feature: domain Description: RVT_N Location: 3284-3521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3572-3935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3572-3935 bp Feature: gene Location: 3981-4121 bp Feature: gene Location: 4203-4502 bp Feature: gene Location: 20052-20255 bp Feature: gene Location: 20748-20915 bp Feature: gene Location: 20926-22119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21076-21727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 076-21 727 bp Feature: domain Description: GIIM Note: maturase Location: 21805-22030 bp Feature: domain Description: GIIM Note: maturase Location: 21 805-22030 bp Feature: gene Location: 22002-22289 bp Feature: gene Location: 22700-22981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), DUF1281_C (pfam18406), RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655)