myRT

myRT report for GCA_002741275.1_ASM274127v1

Download annotations/find similar RTs

Seq: CP024252.1 Escherichia coli O182:H21 strain D181 chromosome, complete genome (4891230 bp)
Overview 1 RT 1: 2594448-2598159 bp Neighborhood of RT #1 [2594448, 2598326] InsE PHA02517 RVT-GII GIIM COG2085 Feature: gene Location: 2594448-2594822 bp Feature: domain Description: InsE Location: 2594559-2594808 bp Feature: domain Description: InsE Location: 2594559-2594808 bp Feature: gene Location: 2594878-2595303 bp Feature: domain Description: PHA02517 Location: 2594902-2595238 bp Feature: domain Description: PHA0251 7 Location: 2594902-2595238 bp Feature: gene Location: 2595895-2597418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2596168-2596900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25961 68-2596900 bp Feature: domain Description: GIIM Note: maturase Location: 2596975-2597173 bp Feature: domain Description: GIIM Note: maturase Location: 2596975-25971 73 bp Feature: gene Location: 2597613-2597747 bp Feature: gene Location: 2597913-2598326 bp Feature: domain Description: COG2085 Location: 2598012-2598159 bp Feature: domain Description: COG2085 Location: 259801 2-25981 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: CP024250.1 Escherichia coli O182:H21 strain D181 plasmid unnamed2, complete sequence (99099 bp)
Overview 1 RT 1: 14757-17725 bp Neighborhood of RT #1 [14757, 17725] Y2_Tnp RVT-GII GIIM Feature: gene Location: 14757-14975 bp Feature: gene Location: 15063-15695 bp Feature: domain Description: Y2_Tnp Location: 15072-15474 bp Feature: domain Description: Y2 _Tnp Location: 15072 -15474 bp Feature: gene Location: 15890-17221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16175-16862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16175-16862 bp Feature: domain Description: GIIM Note: maturase Location: 16979-17147 bp Feature: domain Description: GIIM Note: maturase Location: 16979-17147 bp Feature: gene Location: 17232-17456 bp Feature: gene Location: 17450-17725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y2_Tnp (pfam04986), RVT-GII, GIIM (pfam08388)

Seq: CP024253.1 Escherichia coli O182:H21 strain D181 plasmid unnamed4 (46427 bp)
Overview 1 RT 1: 9745-13915 bp Neighborhood of RT #1 [9745, 13915] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc RVT-GII Feature: gene Location: 9745-9978 bp Feature: domain Description: DUF905 Location: 9775-9973 bp Feature: domain Description: DUF905 Location: 9775-9973 bp Feature: gene Location: 10035-10475 bp Feature: domain Description: PRK13732 Location: 10041-10473 bp Feature: domain Description: PRK13 73 2 Location: 10041-10473 bp Feature: gene Location: 10627-12057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10630-11212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1063 0-11212 bp Feature: domain Description: Intron_maturas2 Location: 11326-11584 bp Feature: domain Description: Intron_maturas2 Location: 113 26-11584 bp Feature: domain Description: HNHc Note: nucleases Location: 11758-11920 bp Feature: domain Description: HNHc Note: nucleases Location: 11758-11920 bp Feature: gene Location: 12051-12569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12318-12558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123 18-12558 bp Feature: gene Location: 13132-13428 bp Feature: gene Location: 13601-13915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)