myRT

myRT report for GCA_002741335.1_ASM274133v1

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Seq: CP024260.1 Escherichia coli strain F5656C1 chromosome, complete genome (4733683 bp)
Overview 1 RT 1: 231072-234284 bp 2 RT 2: 3077205-3081709 bp Neighborhood of RT #1 [231072, 234349] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [3077205, 3081732] InsE PHA02517 RVT-GII GIIM PHA02517 PRK10681 Feature: gene Location: 231072-231242 bp Feature: gene Location: 231270-231686 bp Feature: domain Description: PHA02517 Location: 231273-231678 bp Feature: domain Description: PHA0251 7 Location: 231 273-231 678 bp Feature: gene Location: 231809-233332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 232082-232814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 232082-23281 4 bp Feature: domain Description: GIIM Note: maturase Location: 232889-233087 bp Feature: domain Description: GIIM Note: maturase Location: 232889-233087 bp Feature: gene Location: 233286-233711 bp Feature: gene Location: 233924-234349 bp Feature: domain Description: PHA02517 Location: 233945-234284 bp Feature: domain Description: PHA0251 7 Location: 233945-234284 bp Feature: gene Location: 3077205-3077531 bp Feature: domain Description: InsE Location: 3077208-3077529 bp Feature: domain Description: InsE Location: 3077208-3077529 bp Feature: gene Location: 3077531-3078010 bp Feature: domain Description: PHA02517 Location: 3077591-3077945 bp Feature: domain Description: PHA0251 7 Location: 3077591 -3077945 bp Feature: gene Location: 3078602-3080125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3078875-3079607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3078875-3079607 bp Feature: domain Description: GIIM Note: maturase Location: 3079682-3079880 bp Feature: domain Description: GIIM Note: maturase Location: 3079682-3079880 bp Feature: gene Location: 3080302-3080688 bp Feature: domain Description: PHA02517 Location: 3080305-3080686 bp Feature: domain Description: PHA0251 7 Location: 3080305-3080686 bp Feature: gene Location: 3080950-3081732 bp Feature: domain Description: PRK10681 Location: 3080953-3081709 bp Feature: domain Description: PRK1 0681 Location: 3080953-3081 709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), PRK10681 (DNA-binding transcriptional repressor DeoR; Provisional)

Seq: CP024262.1 Escherichia coli strain F5656C1 plasmid unnamed2, complete sequence (119846 bp)
Overview 1 RT 1: 51502-55256 bp Neighborhood of RT #1 [51502, 55291] PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 51502-51630 bp Feature: gene Location: 51720-51959 bp Feature: domain Description: PHA02517 Location: 51723-51894 bp Feature: domain Description: PHA02 517 Location: 5172 3-51894 bp Feature: gene Location: 52551-54074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52824-53556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 82 4-53556 bp Feature: domain Description: GIIM Note: maturase Location: 53631-53829 bp Feature: domain Description: GIIM Note: maturase Location: 53631-5382 9 bp Feature: gene Location: 54191-54637 bp Feature: domain Description: PHA02517 Location: 54194-54635 bp Feature: domain Description: PHA02 517 Location: 54194-54635 bp Feature: gene Location: 54794-55291 bp Feature: domain Description: COG3547 Location: 54803-55256 bp Feature: domain Description: COG3547 Location: 54803-552 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )