myRT

myRT report for GCA_002741495.1_ASM274149v1

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Seq: CP024263.1 Escherichia coli O169:H41 strain F6326-C1 chromosome, complete genome (4934701 bp)
Overview 1 RT 1: 4105400-4108683 bp 2 RT 2: 4120214-4123853 bp Neighborhood of RT #1 [4105400, 4108748] INT_P4_C PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [4120214, 4124020] InsE PHA02517 RVT-GII GIIM COG2085 Feature: gene Location: 4105400-4105588 bp Feature: domain Description: INT_P4_C Location: 4105403-4105550 bp Feature: domain Description: INT_P4_C Location: 41 05403-41 05550 bp Feature: gene Location: 4105591-4106037 bp Feature: domain Description: PHA02517 Location: 4105594-4106035 bp Feature: domain Description: PHA0251 7 Location: 41 05594-41 06035 bp Feature: gene Location: 4106154-4107677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4106427-4107159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 06427-41 071 59 bp Feature: domain Description: GIIM Note: maturase Location: 4107234-4107432 bp Feature: domain Description: GIIM Note: maturase Location: 41 07234-41 07432 bp Feature: gene Location: 4107631-4108056 bp Feature: gene Location: 4108269-4108748 bp Feature: domain Description: PHA02517 Location: 4108329-4108683 bp Feature: domain Description: PHA0251 7 Location: 41 08329-41 08683 bp Feature: gene Location: 4120214-4120516 bp Feature: domain Description: InsE Location: 4120253-4120502 bp Feature: domain Description: InsE Location: 41 20253-41 20502 bp Feature: gene Location: 4120572-4120997 bp Feature: domain Description: PHA02517 Location: 4120596-4120932 bp Feature: domain Description: PHA0251 7 Location: 41 20596-41 20932 bp Feature: gene Location: 4121589-4123112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4121862-4122594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 21 862-41 22594 bp Feature: domain Description: GIIM Note: maturase Location: 4122669-4122867 bp Feature: domain Description: GIIM Note: maturase Location: 41 22669-41 22867 bp Feature: gene Location: 4123307-4123441 bp Feature: gene Location: 4123607-4124020 bp Feature: domain Description: COG2085 Location: 4123706-4123853 bp Feature: domain Description: COG2085 Location: 41 23706-41 23853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), COG2085 (Predicted dinucleotide-binding enzyme )