myRT

myRT report for GCA_002741575.1_ASM274157v1

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Seq: CP024275.1 Escherichia coli O6:H16 strain M9682-C1 chromosome, complete genome (4778550 bp)
Overview 1 RT 1: 2070874-2074477 bp 2 RT 2: 4052401-4056537 bp Neighborhood of RT #1 [2070874, 2074477] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [4052401, 4056602] PRK10681 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 2070874-2071200 bp Feature: domain Description: InsE Location: 2070886-2071150 bp Feature: domain Description: InsE Location: 2070886-2071 1 50 bp Feature: gene Location: 2071200-2071625 bp Feature: domain Description: PHA02517 Location: 2071221-2071560 bp Feature: domain Description: PHA0251 7 Location: 2071 221 -2071 560 bp Feature: gene Location: 2072217-2073740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2072490-2073222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2072490-2073222 bp Feature: domain Description: GIIM Note: maturase Location: 2073297-2073495 bp Feature: domain Description: GIIM Note: maturase Location: 2073297-2073495 bp Feature: gene Location: 2073863-2074279 bp Feature: domain Description: PHA02517 Location: 2073866-2074271 bp Feature: domain Description: PHA0251 7 Location: 2073866-2074271 bp Feature: gene Location: 2074307-2074477 bp Feature: gene Location: 4052401-4053183 bp Feature: domain Description: PRK10681 Location: 4052404-4053160 bp Feature: domain Description: PRK1 0681 Location: 4052404-40531 60 bp Feature: gene Location: 4053445-4053891 bp Feature: domain Description: PHA02517 Location: 4053448-4053889 bp Feature: domain Description: PHA0251 7 Location: 4053448-4053889 bp Feature: gene Location: 4054008-4055531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4054281-4055013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4054281 -405501 3 bp Feature: domain Description: GIIM Note: maturase Location: 4055088-4055286 bp Feature: domain Description: GIIM Note: maturase Location: 4055088-4055286 bp Feature: gene Location: 4055485-4055910 bp Feature: gene Location: 4056123-4056602 bp Feature: domain Description: PHA02517 Location: 4056183-4056537 bp Feature: domain Description: PHA0251 7 Location: 40561 83-4056537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10681 (DNA-binding transcriptional repressor DeoR; Provisional)

Seq: CP024277.1 Escherichia coli O6:H16 strain M9682-C1 plasmid unnamed2, complete sequence (100184 bp)
Overview 1 RT 1: 29333-33087 bp Neighborhood of RT #1 [29333, 33122] PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 29333-29461 bp Feature: gene Location: 29311-29790 bp Feature: domain Description: PHA02517 Location: 29371-29725 bp Feature: domain Description: PHA02 517 Location: 2 9371-2 972 5 bp Feature: gene Location: 30382-31905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30655-31387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30655-31387 bp Feature: domain Description: GIIM Note: maturase Location: 31462-31660 bp Feature: domain Description: GIIM Note: maturase Location: 31462 -31660 bp Feature: gene Location: 32082-32468 bp Feature: domain Description: PHA02517 Location: 32085-32466 bp Feature: domain Description: PHA02 517 Location: 32 085-32 466 bp Feature: gene Location: 32625-33122 bp Feature: domain Description: COG3547 Location: 32634-33087 bp Feature: domain Description: COG3547 Location: 32 634-33087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )