myRT

myRT report for GCA_002741615.1_ASM274161v1

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Seq: CP024466.1 Shigella dysenteriae strain BU53M1 chromosome, complete genome (4409083 bp)
Overview 1 RT 1: 3769463-3772567 bp Neighborhood of RT #1 [3769463, 3772572] dut slmA RVT-Retrons pyrE Feature: gene Location: 3769463-3769921 bp Feature: domain Description: dut Location: 3769469-3769916 bp Feature: domain Description: dut Location: 3769469-376991 6 bp Feature: gene Location: 3770028-3770624 bp Feature: domain Description: slmA Location: 3770034-3770610 bp Feature: domain Description: slmA Location: 3770034-377061 0 bp Feature: gene Location: 3770953-3771462 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3770959-3771454 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3770959-3771 454 bp Feature: gene Location: 3771505-3771783 bp Feature: gene Location: 3771916-3772572 bp Feature: domain Description: pyrE Location: 3771934-3772567 bp Feature: domain Description: pyrE Location: 3771 934-3772567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336)

Seq: CP024469.1 Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence (184894 bp)
Overview 1 RT 1: 93862-96515 bp Neighborhood of RT #1 [93862, 96515] COG3547 RVT-GII GIIM Feature: gene Location: 93862-94347 bp Feature: domain Description: COG3547 Location: 93880-94333 bp Feature: domain Description: COG3547 Location: 93880-94333 bp Feature: gene Location: 94443-94610 bp Feature: gene Location: 94636-95868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94837-95491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94837-95491 bp Feature: domain Description: GIIM Note: maturase Location: 95569-95791 bp Feature: domain Description: GIIM Note: maturase Location: 95569-95791 bp Feature: gene Location: 95863-96267 bp Feature: gene Location: 96264-96515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)