myRT

myRT report for GCA_002741685.1_ASM274168v1

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Seq: CP024193.1 Klebsiella pneumoniae isolate KSB1_5D plasmid unnamed2, complete sequence (147945 bp)
Overview 1 RT 1: 137572-140820 bp Neighborhood of RT #1 [137572, 140834] RVT-GII PRK10276 Feature: gene Location: 137572-137753 bp Feature: gene Location: 138055-138285 bp Feature: gene Location: 138519-140003 bp Ori: ATQ27127.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138921-139611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 38921 -1 3961 1 bp Feature: gene Location: 140003-140254 bp Feature: gene Location: 140409-140834 bp Ori: ATQ27129.1 Feature: domain Description: PRK10276 Location: 140412-140820 bp Feature: domain Description: PRK1 0276 Location: 1 4041 2-1 40820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP024194.1 Klebsiella pneumoniae isolate KSB1_5D plasmid unnamed3, complete sequence (89345 bp)
Overview 1 RT 1: 2954-6443 bp 2 RT 2: 24323-28079 bp Neighborhood of RT #1 [2954, 6443] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #2 [24323, 28108] PRK10276 RVT-GII PLDc_Nuc Feature: gene Location: 2954-3642 bp Feature: domain Description: InsE Location: 2963-3248 bp Feature: domain Description: InsE Location: 2 963-32 48 bp Feature: gene Location: 3569-4006 bp Feature: gene Location: 4300-5823 bp Ori: ATQ27155.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573-5305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573-5305 bp Feature: domain Description: GIIM Note: maturase Location: 5380-5578 bp Feature: domain Description: GIIM Note: maturase Location: 5380-5578 bp Feature: gene Location: 5904-6083 bp Feature: domain Description: PHA02517 Location: 5907-6084 bp Feature: domain Description: PHA02 517 Location: 5907-6084 bp Feature: gene Location: 6231-6443 bp Feature: gene Location: 24323-24754 bp Ori: ATQ27168.1 Feature: domain Description: PRK10276 Location: 24374-24737 bp Feature: domain Description: PRK102 76 Location: 2 4374-2 4737 bp Feature: gene Location: 24912-25163 bp Feature: gene Location: 25163-26647 bp Ori: ATQ27170.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25565-26255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5565-2 62 55 bp Feature: gene Location: 27117-27548 bp Feature: gene Location: 27581-28108 bp Ori: ATQ27172.1 Feature: domain Description: PLDc_Nuc Location: 27659-28079 bp Feature: domain Description: PLDc_Nuc Location: 2 7659-2 8079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PLDc_Nuc (cd09170)

Seq: CP024191.1 Klebsiella pneumoniae isolate KSB1_5D chromosome, complete genome (5296999 bp)
Overview 1 RT 1: 2956134-2959113 bp 2 RT 2: 3036288-3042727 bp 3 RT 3: 3177372-3181471 bp 4 RT 4: 3522321-3527159 bp Neighborhood of RT #1 [2956134, 2959113] PRK10597 RVT-GII Neighborhood of RT #2 [3036288, 3042768] umuC PRK10276 RVT-GII RVT-GII XerC Neighborhood of RT #3 [3177372, 3181482] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [3522321, 3527209] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 2956134-2956382 bp Ori: ATQ24397.1 Feature: domain Description: PRK10597 Location: 2956137-2956377 bp Feature: domain Description: PRK10597 Location: 295613 7-29563 77 bp Feature: gene Location: 2956605-2956889 bp Feature: gene Location: 2956967-2958451 bp Ori: ATQ24399.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2957369-2958059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29573 69-2958059 bp Feature: gene Location: 2958451-2958702 bp Feature: gene Location: 2958904-2959113 bp Feature: gene Location: 3036288-3037553 bp Ori: ATQ24491.1 Feature: domain Description: umuC Location: 3036291-3037551 bp Feature: domain Description: umuC Location: 3 03 6291-3 03 7551 bp Feature: gene Location: 3037555-3037974 bp Ori: ATQ24492.1 Feature: domain Description: PRK10276 Location: 3037558-3037969 bp Feature: domain Description: PRK10276 Location: 3 03 7558-3 03 7969 bp Feature: gene Location: 3038054-3039538 bp Ori: ATQ24493.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3038456-3039146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 03 8456-3 03 9146 bp Feature: gene Location: 3039538-3039789 bp Feature: gene Location: 3039964-3041448 bp Ori: ATQ24495.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3040366-3041056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 0403 66-3 041056 bp Feature: gene Location: 3041448-3041699 bp Feature: gene Location: 3042346-3042768 bp Ori: ATQ24497.1 Feature: domain Description: XerC Location: 3042382-3042727 bp Feature: domain Description: XerC Location: 3 0423 82-3 042727 bp Feature: gene Location: 3177372-3178637 bp Ori: ATQ24628.1 Feature: domain Description: umuC Location: 3177375-3178635 bp Feature: domain Description: umuC Location: 3 1773 75-3 17863 5 bp Feature: gene Location: 3178640-3179059 bp Ori: ATQ24629.1 Feature: domain Description: PRK10276 Location: 3178643-3179054 bp Feature: domain Description: PRK10276 Location: 3 178643 -3 179054 bp Feature: gene Location: 3179138-3180622 bp Ori: ATQ24630.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3179540-3180230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 179540-3 18023 0 bp Feature: gene Location: 3180622-3180873 bp Feature: gene Location: 3181240-3181482 bp Ori: ATQ24632.1 Feature: domain Description: DinI Location: 3181291-3181471 bp Feature: domain Description: DinI Location: 3 181291-3 181471 bp Feature: gene Location: 3522321-3523199 bp Ori: ATQ24952.1 Feature: domain Description: Phage_CI_repr Location: 3522348-3522531 bp Feature: domain Description: Phage_CI_repr Location: 3 5223 48-3 52253 1 bp Feature: domain Description: Phage_CI_repr Location: 3522660-3522852 bp Feature: domain Description: Phage_CI_repr Location: 3 522660-3 522852 bp Feature: domain Description: Phage_CI_C Location: 3522879-3523173 bp Feature: domain Description: Phage_CI_C Location: 3 522879-3 523 173 bp Feature: gene Location: 3523211-3524155 bp Feature: gene Location: 3524254-3525738 bp Ori: ATQ24954.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3524656-3525346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 524656-3 5253 46 bp Feature: gene Location: 3525738-3525989 bp Feature: gene Location: 3526157-3527209 bp Ori: ATQ24956.1 Feature: domain Description: int Location: 3526160-3527159 bp Feature: domain Description: int Location: 3 526160-3 527159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), RVT-GII, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), XerC (COG4973), DinI (pfam06183), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)