myRT

myRT report for GCA_002752975.1_ASM275297v1

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Seq: CP024563.1 Klebsiella pneumoniae strain INF278 chromosome, complete genome (5293333 bp)
Overview 1 RT 1: 1676974-1683452 bp 2 RT 2: 1760629-1763603 bp 3 RT 3: 3173707-3177806 bp 4 RT 4: 3518656-3523494 bp Neighborhood of RT #1 [1676974, 1683454] XerC RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #2 [1760629, 1763608] RVT-GII PRK10597 Neighborhood of RT #3 [3173707, 3177817] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [3518656, 3523544] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 1676974-1677396 bp Ori: ATR68313.1 Feature: domain Description: XerC Location: 1677010-1677355 bp Feature: domain Description: XerC Location: 1 67701 0-1 677355 bp Feature: gene Location: 1678043-1678294 bp Feature: gene Location: 1678294-1679778 bp Ori: ATR68315.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1678696-1679386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 678696-1 679386 bp Feature: gene Location: 1679856-1680071 bp Feature: gene Location: 1680204-1681688 bp Ori: ATR68316.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1680606-1681296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 680606-1 681 296 bp Feature: gene Location: 1681768-1682187 bp Ori: ATR68317.1 Feature: domain Description: PRK10276 Location: 1681771-1682182 bp Feature: domain Description: PRK1 0276 Location: 1 681 771 -1 6821 82 bp Feature: gene Location: 1682189-1683454 bp Ori: ATR68318.1 Feature: domain Description: umuC Location: 1682192-1683452 bp Feature: domain Description: umuC Location: 1 6821 92-1 683452 bp Feature: gene Location: 1760629-1760838 bp Feature: gene Location: 1761040-1761291 bp Feature: gene Location: 1761291-1762775 bp Ori: ATR68409.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1761693-1762383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 761 693-1 762383 bp Feature: gene Location: 1762853-1763137 bp Feature: gene Location: 1763360-1763608 bp Ori: ATR68411.1 Feature: domain Description: PRK10597 Location: 1763363-1763603 bp Feature: domain Description: PRK1 0597 Location: 1 763363-1 763603 bp Feature: gene Location: 3173707-3174972 bp Ori: ATR69688.1 Feature: domain Description: umuC Location: 3173710-3174970 bp Feature: domain Description: umuC Location: 31 7371 0-31 74970 bp Feature: gene Location: 3174975-3175394 bp Ori: ATR69689.1 Feature: domain Description: PRK10276 Location: 3174978-3175389 bp Feature: domain Description: PRK1 0276 Location: 31 74978-31 75389 bp Feature: gene Location: 3175473-3176957 bp Ori: ATR69690.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3175875-3176565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 75875-31 76565 bp Feature: gene Location: 3176957-3177208 bp Feature: gene Location: 3177575-3177817 bp Ori: ATR69692.1 Feature: domain Description: DinI Location: 3177626-3177806 bp Feature: domain Description: DinI Location: 31 77626-31 77806 bp Feature: gene Location: 3518656-3519534 bp Ori: ATR71715.1 Feature: domain Description: Phage_CI_repr Location: 3518683-3518866 bp Feature: domain Description: Phage_CI_repr Location: 351 8683-351 8866 bp Feature: domain Description: Phage_CI_repr Location: 3518995-3519187 bp Feature: domain Description: Phage_CI_repr Location: 351 8995-351 91 87 bp Feature: domain Description: Phage_CI_C Location: 3519214-3519508 bp Feature: domain Description: Phage_CI_C Location: 351 921 4-351 9508 bp Feature: gene Location: 3519546-3520490 bp Feature: gene Location: 3520589-3522073 bp Ori: ATR70014.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3520991-3521681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3520991 -3521 681 bp Feature: gene Location: 3522073-3522324 bp Feature: gene Location: 3522492-3523544 bp Ori: ATR70016.1 Feature: domain Description: int Location: 3522495-3523494 bp Feature: domain Description: int Location: 3522495-3523494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PRK10597 (DNA damage-inducible protein I; Provisional), DinI (pfam06183), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)

Seq: CP024566.1 Klebsiella pneumoniae strain INF278 plasmid unnamed3, complete sequence (89345 bp)
Overview 1 RT 1: 2954-6443 bp 2 RT 2: 24323-28079 bp Neighborhood of RT #1 [2954, 6443] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #2 [24323, 28108] PRK10276 RVT-GII PLDc_Nuc Feature: gene Location: 2954-3642 bp Feature: domain Description: InsE Location: 2963-3248 bp Feature: domain Description: InsE Location: 2 963-32 48 bp Feature: gene Location: 3569-4006 bp Feature: gene Location: 4300-5823 bp Ori: ATR72182.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573-5305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573-5305 bp Feature: domain Description: GIIM Note: maturase Location: 5380-5578 bp Feature: domain Description: GIIM Note: maturase Location: 5380-5578 bp Feature: gene Location: 5904-6083 bp Feature: domain Description: PHA02517 Location: 5907-6084 bp Feature: domain Description: PHA02 517 Location: 5907-6084 bp Feature: gene Location: 6231-6443 bp Feature: gene Location: 24323-24754 bp Ori: ATR72195.1 Feature: domain Description: PRK10276 Location: 24374-24737 bp Feature: domain Description: PRK102 76 Location: 2 4374-2 4737 bp Feature: gene Location: 24912-25163 bp Feature: gene Location: 25163-26647 bp Ori: ATR72197.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25565-26255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5565-2 62 55 bp Feature: gene Location: 27117-27548 bp Feature: gene Location: 27581-28108 bp Ori: ATR72199.1 Feature: domain Description: PLDc_Nuc Location: 27659-28079 bp Feature: domain Description: PLDc_Nuc Location: 2 7659-2 8079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PLDc_Nuc (cd09170)

Seq: CP024565.1 Klebsiella pneumoniae strain INF278 plasmid unnamed2, complete sequence (147932 bp)
Overview 1 RT 1: 137559-140807 bp Neighborhood of RT #1 [137559, 140821] RVT-GII PRK10276 Feature: gene Location: 137559-137740 bp Feature: gene Location: 138042-138272 bp Feature: gene Location: 138506-139990 bp Ori: ATR72154.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138908-139598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 8908-13 9598 bp Feature: gene Location: 139990-140241 bp Feature: gene Location: 140396-140821 bp Ori: ATR72156.1 Feature: domain Description: PRK10276 Location: 140399-140807 bp Feature: domain Description: PRK10276 Location: 1403 99-140807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)