myRT

myRT report for GCA_002753055.1_ASM275305v1

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Seq: CP024523.1 Klebsiella pneumoniae strain INF158 plasmid unnamed2, complete sequence (147932 bp)
Overview 1 RT 1: 137559-140807 bp Neighborhood of RT #1 [137559, 140821] RVT-GII PRK10276 Feature: gene Location: 137559-137740 bp Feature: gene Location: 138042-138272 bp Feature: gene Location: 138506-139990 bp Ori: ATR28732.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138908-139598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 38908-1 39598 bp Feature: gene Location: 139990-140241 bp Feature: gene Location: 140396-140821 bp Ori: ATR28734.1 Feature: domain Description: PRK10276 Location: 140399-140807 bp Feature: domain Description: PRK1 0276 Location: 1 40399-1 40807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP024524.1 Klebsiella pneumoniae strain INF158 plasmid unnamed3, complete sequence (89345 bp)
Overview 1 RT 1: 2954-6443 bp 2 RT 2: 24323-28079 bp Neighborhood of RT #1 [2954, 6443] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #2 [24323, 28108] PRK10276 RVT-GII PLDc_Nuc Feature: gene Location: 2954-3642 bp Feature: domain Description: InsE Location: 2963-3248 bp Feature: domain Description: InsE Location: 2 963-32 48 bp Feature: gene Location: 3569-4006 bp Feature: gene Location: 4300-5823 bp Ori: ATR28761.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573-5305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573-5305 bp Feature: domain Description: GIIM Note: maturase Location: 5380-5578 bp Feature: domain Description: GIIM Note: maturase Location: 5380-5578 bp Feature: gene Location: 5904-6083 bp Feature: domain Description: PHA02517 Location: 5907-6084 bp Feature: domain Description: PHA02 517 Location: 5907-6084 bp Feature: gene Location: 6231-6443 bp Feature: gene Location: 24323-24754 bp Ori: ATR28774.1 Feature: domain Description: PRK10276 Location: 24374-24737 bp Feature: domain Description: PRK102 76 Location: 2 4374-2 4737 bp Feature: gene Location: 24912-25163 bp Feature: gene Location: 25163-26647 bp Ori: ATR28776.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25565-26255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5565-2 62 55 bp Feature: gene Location: 27117-27548 bp Feature: gene Location: 27581-28108 bp Ori: ATR28778.1 Feature: domain Description: PLDc_Nuc Location: 27659-28079 bp Feature: domain Description: PLDc_Nuc Location: 2 7659-2 8079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PLDc_Nuc (cd09170)

Seq: CP024521.1 Klebsiella pneumoniae strain INF158 chromosome, complete genome (5297118 bp)
Overview 1 RT 1: 1628440-1631419 bp 2 RT 2: 1708594-1715033 bp 3 RT 3: 1849678-1853777 bp 4 RT 4: 2194627-2199465 bp Neighborhood of RT #1 [1628440, 1631419] PRK10597 RVT-GII Neighborhood of RT #2 [1708594, 1715074] umuC PRK10276 RVT-GII RVT-GII XerC Neighborhood of RT #3 [1849678, 1853788] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [2194627, 2199515] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 1628440-1628688 bp Ori: ATR24765.1 Feature: domain Description: PRK10597 Location: 1628443-1628683 bp Feature: domain Description: PRK10597 Location: 1628443 -1628683 bp Feature: gene Location: 1628911-1629195 bp Feature: gene Location: 1629273-1630757 bp Ori: ATR24767.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1629675-1630365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1629675-163 03 65 bp Feature: gene Location: 1630757-1631008 bp Feature: gene Location: 1631210-1631419 bp Feature: gene Location: 1708594-1709859 bp Ori: ATR24858.1 Feature: domain Description: umuC Location: 1708597-1709857 bp Feature: domain Description: umuC Location: 1708597-1709857 bp Feature: gene Location: 1709861-1710280 bp Ori: ATR24859.1 Feature: domain Description: PRK10276 Location: 1709864-1710275 bp Feature: domain Description: PRK10276 Location: 1709864-1710275 bp Feature: gene Location: 1710360-1711844 bp Ori: ATR24860.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1710762-1711452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1710762-1711452 bp Feature: gene Location: 1711844-1712095 bp Feature: gene Location: 1712270-1713754 bp Ori: ATR24862.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1712672-1713362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1712672-1713 3 62 bp Feature: gene Location: 1713754-1714005 bp Feature: gene Location: 1714652-1715074 bp Ori: ATR24864.1 Feature: domain Description: XerC Location: 1714688-1715033 bp Feature: domain Description: XerC Location: 1714688-171503 3 bp Feature: gene Location: 1849678-1850943 bp Ori: ATR24994.1 Feature: domain Description: umuC Location: 1849681-1850941 bp Feature: domain Description: umuC Location: 1849681-1850941 bp Feature: gene Location: 1850946-1851365 bp Ori: ATR24995.1 Feature: domain Description: PRK10276 Location: 1850949-1851360 bp Feature: domain Description: PRK10276 Location: 1850949-18513 60 bp Feature: gene Location: 1851444-1852928 bp Ori: ATR24996.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1851846-1852536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1851846-185253 6 bp Feature: gene Location: 1852928-1853179 bp Feature: gene Location: 1853546-1853788 bp Ori: ATR24998.1 Feature: domain Description: DinI Location: 1853597-1853777 bp Feature: domain Description: DinI Location: 1853 597-1853 777 bp Feature: gene Location: 2194627-2195505 bp Ori: ATR25318.1 Feature: domain Description: Phage_CI_repr Location: 2194654-2194837 bp Feature: domain Description: Phage_CI_repr Location: 2194654-219483 7 bp Feature: domain Description: Phage_CI_repr Location: 2194966-2195158 bp Feature: domain Description: Phage_CI_repr Location: 2194966-2195158 bp Feature: domain Description: Phage_CI_C Location: 2195185-2195479 bp Feature: domain Description: Phage_CI_C Location: 2195185-2195479 bp Feature: gene Location: 2195517-2196461 bp Feature: gene Location: 2196560-2198044 bp Ori: ATR25320.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2196962-2197652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2196962-2197652 bp Feature: gene Location: 2198044-2198295 bp Feature: gene Location: 2198463-2199515 bp Ori: ATR25322.1 Feature: domain Description: int Location: 2198466-2199465 bp Feature: domain Description: int Location: 2198466-2199465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), RVT-GII, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), XerC (COG4973), DinI (pfam06183), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)