myRT

myRT report for GCA_002753075.1_ASM275307v1

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Seq: CP024530.1 Klebsiella pneumoniae strain INF157 plasmid unnamed2, complete sequence (147932 bp)
Overview 1 RT 1: 137559-140807 bp Neighborhood of RT #1 [137559, 140821] RVT-GII PRK10276 Feature: gene Location: 137559-137740 bp Feature: gene Location: 138042-138272 bp Feature: gene Location: 138506-139990 bp Ori: ATR34297.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138908-139598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 38908-1 39598 bp Feature: gene Location: 139990-140241 bp Feature: gene Location: 140396-140821 bp Ori: ATR34299.1 Feature: domain Description: PRK10276 Location: 140399-140807 bp Feature: domain Description: PRK1 0276 Location: 1 40399-1 40807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP024528.1 Klebsiella pneumoniae strain INF157 chromosome, complete genome (5297108 bp)
Overview 1 RT 1: 2956244-2959223 bp 2 RT 2: 3036398-3042837 bp 3 RT 3: 3177482-3181581 bp 4 RT 4: 3522431-3527269 bp Neighborhood of RT #1 [2956244, 2959223] PRK10597 RVT-GII Neighborhood of RT #2 [3036398, 3042878] umuC PRK10276 RVT-GII RVT-GII XerC Neighborhood of RT #3 [3177482, 3181592] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [3522431, 3527319] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 2956244-2956492 bp Ori: ATR31566.1 Feature: domain Description: PRK10597 Location: 2956247-2956487 bp Feature: domain Description: PRK10597 Location: 2 9562 47-2 956487 bp Feature: gene Location: 2956715-2956999 bp Feature: gene Location: 2957077-2958561 bp Ori: ATR31568.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2957479-2958169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 957479-2 958169 bp Feature: gene Location: 2958561-2958812 bp Feature: gene Location: 2959014-2959223 bp Feature: gene Location: 3036398-3037663 bp Ori: ATR31659.1 Feature: domain Description: umuC Location: 3036401-3037661 bp Feature: domain Description: umuC Location: 3036401-3037661 bp Feature: gene Location: 3037665-3038084 bp Ori: ATR31660.1 Feature: domain Description: PRK10276 Location: 3037668-3038079 bp Feature: domain Description: PRK102 76 Location: 3037668-3038079 bp Feature: gene Location: 3038164-3039648 bp Ori: ATR31661.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3038566-3039256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3038566-30392 56 bp Feature: gene Location: 3039648-3039899 bp Feature: gene Location: 3040074-3041558 bp Ori: ATR31663.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3040476-3041166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3040476-3041166 bp Feature: gene Location: 3041558-3041809 bp Feature: gene Location: 3042456-3042878 bp Ori: ATR31665.1 Feature: domain Description: XerC Location: 3042492-3042837 bp Feature: domain Description: XerC Location: 3042 492 -3042 837 bp Feature: gene Location: 3177482-3178747 bp Ori: ATR31796.1 Feature: domain Description: umuC Location: 3177485-3178745 bp Feature: domain Description: umuC Location: 3177485-3178745 bp Feature: gene Location: 3178750-3179169 bp Ori: ATR31797.1 Feature: domain Description: PRK10276 Location: 3178753-3179164 bp Feature: domain Description: PRK102 76 Location: 3178753-3179164 bp Feature: gene Location: 3179248-3180732 bp Ori: ATR31798.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3179650-3180340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3179650-3180340 bp Feature: gene Location: 3180732-3180983 bp Feature: gene Location: 3181350-3181592 bp Ori: ATR31800.1 Feature: domain Description: DinI Location: 3181401-3181581 bp Feature: domain Description: DinI Location: 3181401-3181581 bp Feature: gene Location: 3522431-3523309 bp Ori: ATR33828.1 Feature: domain Description: Phage_CI_repr Location: 3522458-3522641 bp Feature: domain Description: Phage_CI_repr Location: 352 2 458-352 2 641 bp Feature: domain Description: Phage_CI_repr Location: 3522770-3522962 bp Feature: domain Description: Phage_CI_repr Location: 352 2 770-352 2 962 bp Feature: domain Description: Phage_CI_C Location: 3522989-3523283 bp Feature: domain Description: Phage_CI_C Location: 352 2 989-352 32 83 bp Feature: gene Location: 3523321-3524265 bp Feature: gene Location: 3524364-3525848 bp Ori: ATR32121.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3524766-3525456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352 4766-352 5456 bp Feature: gene Location: 3525848-3526099 bp Feature: gene Location: 3526267-3527319 bp Ori: ATR32123.1 Feature: domain Description: int Location: 3526270-3527269 bp Feature: domain Description: int Location: 352 62 70-352 72 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), RVT-GII, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), XerC (COG4973), DinI (pfam06183), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)

Seq: CP024531.1 Klebsiella pneumoniae strain INF157 plasmid unnamed3, complete sequence (89345 bp)
Overview 1 RT 1: 2954-6443 bp 2 RT 2: 24323-28079 bp Neighborhood of RT #1 [2954, 6443] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #2 [24323, 28108] PRK10276 RVT-GII PLDc_Nuc Feature: gene Location: 2954-3642 bp Feature: domain Description: InsE Location: 2963-3248 bp Feature: domain Description: InsE Location: 2963 -3 248 bp Feature: gene Location: 3569-4006 bp Feature: gene Location: 4300-5823 bp Ori: ATR34326.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573-5305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573 -53 05 bp Feature: domain Description: GIIM Note: maturase Location: 5380-5578 bp Feature: domain Description: GIIM Note: maturase Location: 53 80-5578 bp Feature: gene Location: 5904-6083 bp Feature: domain Description: PHA02517 Location: 5907-6084 bp Feature: domain Description: PHA02517 Location: 5907-6084 bp Feature: gene Location: 6231-6443 bp Feature: gene Location: 24323-24754 bp Ori: ATR34339.1 Feature: domain Description: PRK10276 Location: 24374-24737 bp Feature: domain Description: PRK10276 Location: 243 74-2473 7 bp Feature: gene Location: 24912-25163 bp Feature: gene Location: 25163-26647 bp Ori: ATR34341.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25565-26255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25565-26255 bp Feature: gene Location: 27117-27548 bp Feature: gene Location: 27581-28108 bp Ori: ATR34343.1 Feature: domain Description: PLDc_Nuc Location: 27659-28079 bp Feature: domain Description: PLDc_Nuc Location: 27659-28079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PLDc_Nuc (cd09170)