myRT

myRT report for GCA_002753405.1_ASM275340v1

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Seq: CP024551.1 Klebsiella pneumoniae strain INF163 plasmid unnamed2, complete sequence (147932 bp)
Overview 1 RT 1: 137559-140807 bp Neighborhood of RT #1 [137559, 140821] RVT-GII PRK10276 Feature: gene Location: 137559-137740 bp Feature: gene Location: 138042-138272 bp Feature: gene Location: 138506-139990 bp Ori: ATR61063.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138908-139598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 38908-1 39598 bp Feature: gene Location: 139990-140241 bp Feature: gene Location: 140396-140821 bp Ori: ATR61065.1 Feature: domain Description: PRK10276 Location: 140399-140807 bp Feature: domain Description: PRK1 0276 Location: 1 40399-1 40807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP024549.1 Klebsiella pneumoniae strain INF163 chromosome, complete genome (5298228 bp)
Overview 1 RT 1: 2957364-2960343 bp 2 RT 2: 3037518-3043957 bp 3 RT 3: 3178602-3182701 bp 4 RT 4: 3523551-3528389 bp Neighborhood of RT #1 [2957364, 2960343] PRK10597 RVT-GII Neighborhood of RT #2 [3037518, 3043998] umuC PRK10276 RVT-GII RVT-GII XerC Neighborhood of RT #3 [3178602, 3182712] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [3523551, 3528439] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 2957364-2957612 bp Ori: ATR58366.1 Feature: domain Description: PRK10597 Location: 2957367-2957607 bp Feature: domain Description: PRK10597 Location: 2 957367-2 957607 bp Feature: gene Location: 2957835-2958119 bp Feature: gene Location: 2958197-2959681 bp Ori: ATR58368.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2958599-2959289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 958599-2 9592 89 bp Feature: gene Location: 2959681-2959932 bp Feature: gene Location: 2960134-2960343 bp Feature: gene Location: 3037518-3038783 bp Ori: ATR58460.1 Feature: domain Description: umuC Location: 3037521-3038781 bp Feature: domain Description: umuC Location: 303752 1-3038781 bp Feature: gene Location: 3038785-3039204 bp Ori: ATR58461.1 Feature: domain Description: PRK10276 Location: 3038788-3039199 bp Feature: domain Description: PRK102 76 Location: 3038788-3039199 bp Feature: gene Location: 3039284-3040768 bp Ori: ATR58462.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3039686-3040376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3039686-3040376 bp Feature: gene Location: 3040768-3041019 bp Feature: gene Location: 3041194-3042678 bp Ori: ATR58464.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3041596-3042286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3041596-3042 2 86 bp Feature: gene Location: 3042678-3042929 bp Feature: gene Location: 3043576-3043998 bp Ori: ATR58466.1 Feature: domain Description: XerC Location: 3043612-3043957 bp Feature: domain Description: XerC Location: 3043612 -3043957 bp Feature: gene Location: 3178602-3179867 bp Ori: ATR58596.1 Feature: domain Description: umuC Location: 3178605-3179865 bp Feature: domain Description: umuC Location: 3178605-3179865 bp Feature: gene Location: 3179870-3180289 bp Ori: ATR58597.1 Feature: domain Description: PRK10276 Location: 3179873-3180284 bp Feature: domain Description: PRK102 76 Location: 3179873-31802 84 bp Feature: gene Location: 3180368-3181852 bp Ori: ATR58598.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3180770-3181460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3180770-3181460 bp Feature: gene Location: 3181852-3182103 bp Feature: gene Location: 3182470-3182712 bp Ori: ATR58600.1 Feature: domain Description: DinI Location: 3182521-3182701 bp Feature: domain Description: DinI Location: 3182 52 1-3182 701 bp Feature: gene Location: 3523551-3524429 bp Ori: ATR58921.1 Feature: domain Description: Phage_CI_repr Location: 3523578-3523761 bp Feature: domain Description: Phage_CI_repr Location: 352 3578-352 3761 bp Feature: domain Description: Phage_CI_repr Location: 3523890-3524082 bp Feature: domain Description: Phage_CI_repr Location: 352 3890-352 4082 bp Feature: domain Description: Phage_CI_C Location: 3524109-3524403 bp Feature: domain Description: Phage_CI_C Location: 352 4109-352 4403 bp Feature: gene Location: 3524441-3525385 bp Feature: gene Location: 3525484-3526968 bp Ori: ATR58923.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3525886-3526576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352 5886-352 6576 bp Feature: gene Location: 3526968-3527219 bp Feature: gene Location: 3527387-3528439 bp Ori: ATR58925.1 Feature: domain Description: int Location: 3527390-3528389 bp Feature: domain Description: int Location: 352 7390-352 8389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), RVT-GII, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), XerC (COG4973), DinI (pfam06183), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)

Seq: CP024552.1 Klebsiella pneumoniae strain INF163 plasmid unnamed3, complete sequence (89345 bp)
Overview 1 RT 1: 2954-6443 bp 2 RT 2: 24323-28079 bp Neighborhood of RT #1 [2954, 6443] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #2 [24323, 28108] PRK10276 RVT-GII PLDc_Nuc Feature: gene Location: 2954-3642 bp Feature: domain Description: InsE Location: 2963-3248 bp Feature: domain Description: InsE Location: 2963 -3 248 bp Feature: gene Location: 3569-4006 bp Feature: gene Location: 4300-5823 bp Ori: ATR61090.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573-5305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573 -53 05 bp Feature: domain Description: GIIM Note: maturase Location: 5380-5578 bp Feature: domain Description: GIIM Note: maturase Location: 53 80-5578 bp Feature: gene Location: 5904-6083 bp Feature: domain Description: PHA02517 Location: 5907-6084 bp Feature: domain Description: PHA02517 Location: 5907-6084 bp Feature: gene Location: 6231-6443 bp Feature: gene Location: 24323-24754 bp Ori: ATR61103.1 Feature: domain Description: PRK10276 Location: 24374-24737 bp Feature: domain Description: PRK10276 Location: 243 74-2473 7 bp Feature: gene Location: 24912-25163 bp Feature: gene Location: 25163-26647 bp Ori: ATR61105.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25565-26255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25565-26255 bp Feature: gene Location: 27117-27548 bp Feature: gene Location: 27581-28108 bp Ori: ATR61107.1 Feature: domain Description: PLDc_Nuc Location: 27659-28079 bp Feature: domain Description: PLDc_Nuc Location: 27659-28079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PLDc_Nuc (cd09170)