myRT

myRT report for GCA_002753555.1_ASM275355v1

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Seq: CP024556.1 Klebsiella pneumoniae strain INF164 chromosome, complete genome (5298459 bp)
Overview 1 RT 1: 2957594-2960573 bp 2 RT 2: 3037748-3044187 bp 3 RT 3: 3178832-3182931 bp 4 RT 4: 3523781-3528619 bp Neighborhood of RT #1 [2957594, 2960573] PRK10597 RVT-GII Neighborhood of RT #2 [3037748, 3044228] umuC PRK10276 RVT-GII RVT-GII XerC Neighborhood of RT #3 [3178832, 3182942] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [3523781, 3528669] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 2957594-2957842 bp Ori: ATR63901.1 Feature: domain Description: PRK10597 Location: 2957597-2957837 bp Feature: domain Description: PRK1 0597 Location: 2957597-2957837 bp Feature: gene Location: 2958065-2958349 bp Feature: gene Location: 2958427-2959911 bp Ori: ATR63903.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2958829-2959519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2958829-295951 9 bp Feature: gene Location: 2959911-2960162 bp Feature: gene Location: 2960364-2960573 bp Feature: gene Location: 3037748-3039013 bp Ori: ATR63995.1 Feature: domain Description: umuC Location: 3037751-3039011 bp Feature: domain Description: umuC Location: 3037751 -303901 1 bp Feature: gene Location: 3039015-3039434 bp Ori: ATR63996.1 Feature: domain Description: PRK10276 Location: 3039018-3039429 bp Feature: domain Description: PRK1 0276 Location: 303901 8-3039429 bp Feature: gene Location: 3039514-3040998 bp Ori: ATR63997.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3039916-3040606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303991 6-3040606 bp Feature: gene Location: 3040998-3041249 bp Feature: gene Location: 3041424-3042908 bp Ori: ATR63999.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3041826-3042516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3041 826-304251 6 bp Feature: gene Location: 3042908-3043159 bp Feature: gene Location: 3043806-3044228 bp Ori: ATR64001.1 Feature: domain Description: XerC Location: 3043842-3044187 bp Feature: domain Description: XerC Location: 3043842-30441 87 bp Feature: gene Location: 3178832-3180097 bp Ori: ATR64131.1 Feature: domain Description: umuC Location: 3178835-3180095 bp Feature: domain Description: umuC Location: 31 78835-31 80095 bp Feature: gene Location: 3180100-3180519 bp Ori: ATR64132.1 Feature: domain Description: PRK10276 Location: 3180103-3180514 bp Feature: domain Description: PRK1 0276 Location: 31 801 03-31 8051 4 bp Feature: gene Location: 3180598-3182082 bp Ori: ATR64133.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3181000-3181690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 81 000-31 81 690 bp Feature: gene Location: 3182082-3182333 bp Feature: gene Location: 3182700-3182942 bp Ori: ATR64135.1 Feature: domain Description: DinI Location: 3182751-3182931 bp Feature: domain Description: DinI Location: 31 82751 -31 82931 bp Feature: gene Location: 3523781-3524659 bp Ori: ATR66155.1 Feature: domain Description: Phage_CI_repr Location: 3523808-3523991 bp Feature: domain Description: Phage_CI_repr Location: 3523808-3523991 bp Feature: domain Description: Phage_CI_repr Location: 3524120-3524312 bp Feature: domain Description: Phage_CI_repr Location: 35241 20-352431 2 bp Feature: domain Description: Phage_CI_C Location: 3524339-3524633 bp Feature: domain Description: Phage_CI_C Location: 3524339-3524633 bp Feature: gene Location: 3524671-3525615 bp Feature: gene Location: 3525714-3527198 bp Ori: ATR64457.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3526116-3526806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35261 1 6-3526806 bp Feature: gene Location: 3527198-3527449 bp Feature: gene Location: 3527617-3528669 bp Ori: ATR64459.1 Feature: domain Description: int Location: 3527620-3528619 bp Feature: domain Description: int Location: 3527620-352861 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), RVT-GII, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), XerC (COG4973), DinI (pfam06183), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)

Seq: CP024558.1 Klebsiella pneumoniae strain INF164 plasmid unnamed2, complete sequence (147945 bp)
Overview 1 RT 1: 137572-140820 bp Neighborhood of RT #1 [137572, 140834] RVT-GII PRK10276 Feature: gene Location: 137572-137753 bp Feature: gene Location: 138055-138285 bp Feature: gene Location: 138519-140003 bp Ori: ATR66624.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138921-139611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13892 1-139611 bp Feature: gene Location: 140003-140254 bp Feature: gene Location: 140409-140834 bp Ori: ATR66626.1 Feature: domain Description: PRK10276 Location: 140412-140820 bp Feature: domain Description: PRK102 76 Location: 140412 -14082 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP024559.1 Klebsiella pneumoniae strain INF164 plasmid unnamed3, complete sequence (89345 bp)
Overview 1 RT 1: 2954-6443 bp 2 RT 2: 24323-28079 bp Neighborhood of RT #1 [2954, 6443] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #2 [24323, 28108] PRK10276 RVT-GII PLDc_Nuc Feature: gene Location: 2954-3642 bp Feature: domain Description: InsE Location: 2963-3248 bp Feature: domain Description: InsE Location: 2963 -3 248 bp Feature: gene Location: 3569-4006 bp Feature: gene Location: 4300-5823 bp Ori: ATR66653.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573-5305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573 -53 05 bp Feature: domain Description: GIIM Note: maturase Location: 5380-5578 bp Feature: domain Description: GIIM Note: maturase Location: 53 80-5578 bp Feature: gene Location: 5904-6083 bp Feature: domain Description: PHA02517 Location: 5907-6084 bp Feature: domain Description: PHA02517 Location: 5907-6084 bp Feature: gene Location: 6231-6443 bp Feature: gene Location: 24323-24754 bp Ori: ATR66666.1 Feature: domain Description: PRK10276 Location: 24374-24737 bp Feature: domain Description: PRK10276 Location: 243 74-2473 7 bp Feature: gene Location: 24912-25163 bp Feature: gene Location: 25163-26647 bp Ori: ATR66668.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25565-26255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25565-26255 bp Feature: gene Location: 27117-27548 bp Feature: gene Location: 27581-28108 bp Ori: ATR66670.1 Feature: domain Description: PLDc_Nuc Location: 27659-28079 bp Feature: domain Description: PLDc_Nuc Location: 27659-28079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PLDc_Nuc (cd09170)